Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669448

Identifier: 15669448

GI number: 15669448

Start: 1204361

End: 1205530

Strand: Direct

Name: 15669448

Synonym: MJ1262

Alternate gene names: NA

Gene position: 1204361-1205530 (Clockwise)

Preceding gene: 15669447

Following gene: 15669449

Centisome position: 72.34

GC content: 26.58

Gene sequence:

>1170_bases
ATGTTTTTTAAAATTTTTGTAGAAAATACAGTTATATTGCCTAATCCTTTAATTCTTACTAAAATTGAGGGATTATTGAT
GATTGAATATCTATTAAAAAACAGAGAGCAAATTATTAAAAAAATGGAAAAAATTAATGATATCAATCGTAAAGAAGTTG
AAGAAAAATGGATTTTGGATAATTTTGAAAATCCAAAAGATATGGGATTTGCAGGAGGAGATGGAAGCTGTAATAAATTG
GATTACATATCTTTCTCATTCTATGGAGTTGGGGCCGTTAGCTTTATACACGGCAGAGGGGAAAAAGTAAAAAAAGCTAA
GGAGGAGTATATATTTGATATAACCCATCCTTTGGATATTGAAGATAGAATAAGGAGATATATGCTAACTTTGGAATTAA
AAACAGCCCTTTATGTTCTCAAAAATTATAATATTGATTATTACATTTTTGATGGGTCTTTATTTTCTTTGTTGATATTC
ACAAAAAAAGGTATAGAGATGTATGAGAGAGAGTTAGAAGAGATTTATAATGAATATGGAAAAGAATTTAATAAAAAAAT
TGATGAAGAAACAAAATCTGGAGAAATTGGCATTATATCAAAAGATTTGAACTTGGAATTAAATAAAAAAATATTAGTTG
AGCATGTTGAATATATTTTAACATTAACAAAACTTATTAACGAATTTAAAGATAGAATTATAGGAATATCAAAAACTTCA
AAAATAAACATTTATTTCGATAAAAACATGCCTGATATAGCCATATTTACAAAATATACCGACAAATCTGGTTATTCAGA
ACCAATTGACTTTGTTAATAAATTAGGGGATGAAAAGAAAGAAAAGCATAAACAATTAAGTAGTGTGGTAAAAGGAATAA
ACTTTATTAAAAACAAGCCATTCTATGCAAAAATTGACACTGCATATATACAATTTGTGAGATTAGAAGATAACTGTGGA
GTTGTTGGATTAACAAGCTTCAATAAAATAGATAAAGAAGTCTTATCCTCATTAAAAGAAATATCAATTAATGGCTACCC
TTATATATTAAAAAAATCCCATGAAACAGTTGAGATAACCACTAAAAAACTTGAAGCAATTGCTAAACTATTAAATATAG
ATGACCCTATAGCAAGGCACATCTTAGGGAAGAAAAAAAAGAAATTTTAG

Upstream 100 bases:

>100_bases
CGCAATCGCCCCGTAGGGGCGAGTAATGAAATCCTTTAGGATTTCATCTGATGGAGGCTTCCTCTATGCTTATTGGAACG
ATTGAGGGAGAATTATTTTA

Downstream 100 bases:

>100_bases
TGTCTTTCAAAAAAGGTATTAAAGTTTATTAAGGAAATTTGAATGCCTTCTATAAGAAGGCGTTCATTAATACATTAATA
GTTATTACAAAATATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MFFKIFVENTVILPNPLILTKIEGLLMIEYLLKNREQIIKKMEKINDINRKEVEEKWILDNFENPKDMGFAGGDGSCNKL
DYISFSFYGVGAVSFIHGRGEKVKKAKEEYIFDITHPLDIEDRIRRYMLTLELKTALYVLKNYNIDYYIFDGSLFSLLIF
TKKGIEMYERELEEIYNEYGKEFNKKIDEETKSGEIGIISKDLNLELNKKILVEHVEYILTLTKLINEFKDRIIGISKTS
KINIYFDKNMPDIAIFTKYTDKSGYSEPIDFVNKLGDEKKEKHKQLSSVVKGINFIKNKPFYAKIDTAYIQFVRLEDNCG
VVGLTSFNKIDKEVLSSLKEISINGYPYILKKSHETVEITTKKLEAIAKLLNIDDPIARHILGKKKKKF

Sequences:

>Translated_389_residues
MFFKIFVENTVILPNPLILTKIEGLLMIEYLLKNREQIIKKMEKINDINRKEVEEKWILDNFENPKDMGFAGGDGSCNKL
DYISFSFYGVGAVSFIHGRGEKVKKAKEEYIFDITHPLDIEDRIRRYMLTLELKTALYVLKNYNIDYYIFDGSLFSLLIF
TKKGIEMYERELEEIYNEYGKEFNKKIDEETKSGEIGIISKDLNLELNKKILVEHVEYILTLTKLINEFKDRIIGISKTS
KINIYFDKNMPDIAIFTKYTDKSGYSEPIDFVNKLGDEKKEKHKQLSSVVKGINFIKNKPFYAKIDTAYIQFVRLEDNCG
VVGLTSFNKIDKEVLSSLKEISINGYPYILKKSHETVEITTKKLEAIAKLLNIDDPIARHILGKKKKKF
>Mature_389_residues
MFFKIFVENTVILPNPLILTKIEGLLMIEYLLKNREQIIKKMEKINDINRKEVEEKWILDNFENPKDMGFAGGDGSCNKL
DYISFSFYGVGAVSFIHGRGEKVKKAKEEYIFDITHPLDIEDRIRRYMLTLELKTALYVLKNYNIDYYIFDGSLFSLLIF
TKKGIEMYERELEEIYNEYGKEFNKKIDEETKSGEIGIISKDLNLELNKKILVEHVEYILTLTKLINEFKDRIIGISKTS
KINIYFDKNMPDIAIFTKYTDKSGYSEPIDFVNKLGDEKKEKHKQLSSVVKGINFIKNKPFYAKIDTAYIQFVRLEDNCG
VVGLTSFNKIDKEVLSSLKEISINGYPYILKKSHETVEITTKKLEAIAKLLNIDDPIARHILGKKKKKF

Specific function: Unknown

COG id: COG1630

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1262_METJA (Q58658)

Other databases:

- EMBL:   L77117
- PIR:   E64457
- RefSeq:   NP_248258.1
- ProteinModelPortal:   Q58658
- GeneID:   1452160
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1262
- NMPDR:   fig|243232.1.peg.1295
- TIGR:   MJ1262
- HOGENOM:   HBG540376
- OMA:   ILKKSHE
- ProtClustDB:   CLSK876510
- BioCyc:   MJAN243232:MJ_1262-MONOMER
- InterPro:   IPR018977
- SMART:   SM00933

Pfam domain/function: PF09376 NurA

EC number: NA

Molecular weight: Translated: 45314; Mature: 45314

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKIFVENTVILPNPLILTKIEGLLMIEYLLKNREQIIKKMEKINDINRKEVEEKWILD
CEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
NFENPKDMGFAGGDGSCNKLDYISFSFYGVGAVSFIHGRGEKVKKAKEEYIFDITHPLDI
CCCCCHHCCCCCCCCCCCCEEEEEEEEECCCHHEEECCCCHHHHHHHHHHEEECCCCCCH
EDRIRRYMLTLELKTALYVLKNYNIDYYIFDGSLFSLLIFTKKGIEMYERELEEIYNEYG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KEFNKKIDEETKSGEIGIISKDLNLELNKKILVEHVEYILTLTKLINEFKDRIIGISKTS
HHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
KINIYFDKNMPDIAIFTKYTDKSGYSEPIDFVNKLGDEKKEKHKQLSSVVKGINFIKNKP
EEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
FYAKIDTAYIQFVRLEDNCGVVGLTSFNKIDKEVLSSLKEISINGYPYILKKSHETVEIT
CEEEEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHH
TKKLEAIAKLLNIDDPIARHILGKKKKKF
HHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MFFKIFVENTVILPNPLILTKIEGLLMIEYLLKNREQIIKKMEKINDINRKEVEEKWILD
CEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
NFENPKDMGFAGGDGSCNKLDYISFSFYGVGAVSFIHGRGEKVKKAKEEYIFDITHPLDI
CCCCCHHCCCCCCCCCCCCEEEEEEEEECCCHHEEECCCCHHHHHHHHHHEEECCCCCCH
EDRIRRYMLTLELKTALYVLKNYNIDYYIFDGSLFSLLIFTKKGIEMYERELEEIYNEYG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KEFNKKIDEETKSGEIGIISKDLNLELNKKILVEHVEYILTLTKLINEFKDRIIGISKTS
HHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
KINIYFDKNMPDIAIFTKYTDKSGYSEPIDFVNKLGDEKKEKHKQLSSVVKGINFIKNKP
EEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
FYAKIDTAYIQFVRLEDNCGVVGLTSFNKIDKEVLSSLKEISINGYPYILKKSHETVEIT
CEEEEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHH
TKKLEAIAKLLNIDDPIARHILGKKKKKF
HHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087