| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669401
Identifier: 15669401
GI number: 15669401
Start: 1159865
End: 1160230
Strand: Reverse
Name: 15669401
Synonym: MJ1216
Alternate gene names: NA
Gene position: 1160230-1159865 (Counterclockwise)
Preceding gene: 15669402
Following gene: 15669400
Centisome position: 69.68
GC content: 31.42
Gene sequence:
>366_bases ATGCCGAAGAGAGATATAAAGGCATTTTTATATGATATTTTAGAGTATATGGATGACATAATTAACTTTACTAAAAATAT GGAATATGAGGAGTTTATAAACAATAAGGCAATAAAATATGCGGTTGTTAGATGCTTAGAGGTTATTGGAGAGGCGGTTA AAAAGATACCAAAGGATATTAGAGAAAAATATCCTCACATCCCATTCAAAGAATTGGCTGGAATGAGAGATAAATTAATC CACCAATATTTTGGTGTAGATTATCTAACCGTTTGGGAGACAGCAAAATATGAAATTCCAGAGATAAAGAAAGAATTTGA AAAGATTATAAAAGACATTGAGGGGAAGGATGAAAACTCTCTCTGA
Upstream 100 bases:
>100_bases TTGGGAATTAAAGTTGATTTAATCACTAAAAACTCCATCCACAACCCTTATGTAAAAAAATCCATTGAAGAAGACTTAAT TTATATTTAATGGTGGTTAA
Downstream 100 bases:
>100_bases AATAAAAGAAATCTTAAGGAAACATAAAAAAGAATTAAAAGAAAACTATAAAGTTAAATCTATCGCTATATTTGGCTCTT ATGCAAGAGGAGAGCAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPKRDIKAFLYDILEYMDDIINFTKNMEYEEFINNKAIKYAVVRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDIEGKDENSL
Sequences:
>Translated_121_residues MPKRDIKAFLYDILEYMDDIINFTKNMEYEEFINNKAIKYAVVRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDIEGKDENSL >Mature_120_residues PKRDIKAFLYDILEYMDDIINFTKNMEYEEFINNKAIKYAVVRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLIH QYFGVDYLTVWETAKYEIPEIKKEFEKIIKDIEGKDENSL
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1216_METJA (Q58613)
Other databases:
- EMBL: L77117 - PIR: G64451 - RefSeq: NP_248211.1 - ProteinModelPortal: Q58613 - GeneID: 1452112 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1216 - NMPDR: fig|243232.1.peg.1248 - TIGR: MJ1216 - HOGENOM: HBG660714 - OMA: ILEAICQ - ProtClustDB: CLSK214456 - BioCyc: MJAN243232:MJ_1216-MONOMER - InterPro: IPR008201
Pfam domain/function: PF01934 DUF86
EC number: NA
Molecular weight: Translated: 14498; Mature: 14367
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRDIKAFLYDILEYMDDIINFTKNMEYEEFINNKAIKYAVVRCLEVIGEAVKKIPKDI CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDIEGKDENS HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC L C >Mature Secondary Structure PKRDIKAFLYDILEYMDDIINFTKNMEYEEFINNKAIKYAVVRCLEVIGEAVKKIPKDI CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDIEGKDENS HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087