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The map label for this gene is vhuB

Identifier: 15669380

GI number: 15669380

Start: 1134586

End: 1135770

Strand: Direct

Name: vhuB

Synonym: MJ1193

Alternate gene names: 15669380

Gene position: 1134586-1135770 (Clockwise)

Preceding gene: 298575368

Following gene: 15669383

Centisome position: 68.14

GC content: 38.31

Gene sequence:

>1185_bases
ATGAGATTAATGAGCATAACAATTCAAAAAGATGCTTGTTTAGTCTGTTATGCGTGTCAGGCGGAGTGTCCTACCAAAGC
AATAGATATAGATAGTTTTAAAGTATGCAACTTATGCATGGAGTGTGTTAAAGTCTGCCCAACGGGAGCTTTGGTGGAGG
AGGAGATTGAAGTTAATGGGAAGAAGTTGAAGAGGGTTAATTATTTAGCTCATAAGTGTGAGAAATGTGGGCAGTGTGCT
GAGGCTTGTCCTATTGGCATAAAAAAGGTTGATGATGATTTCCCTTACTCAAAGGGGCATTGTGTCCTCTGTCAAAAGTG
TATTGACGTGTGTCCAATAGAGATCATTTCATTACCTGGAGTTATTGATAAGCCTAAGAAGGAAATAAAGCCACCAAAAG
AACCGATAGCAGTTACTGATGCTTGTGTTGGTTGTGGAATTTGTGTTCCTGAATGTCCAGTTAATGCAATAACCTTAGAG
AATAATAAAGCAGTCATCGATAAGAGTAAGTGTATTTACTGCAGTATTTGTGCCCAAACATGTCCATGGAATGCTATATT
TGTAGCTGGGAAAATACCTAAGAAGAGGAGGAAGGAAGTTAAGAAGTTTGAAGTTAATGCAGAGAAGTGTATTTATTGTC
TAAAGTGTGTTGAAGTCTGTCCGGGAGATATGATTAAGGTTGATGAGGAAAACTTAATCGTTATTCCACCAAAATCATGC
CCAGCTTGTAAGCTCTGTGTTAATATCTGTCCAGTCGATGCTTTAGATTTAGAGGTTAAACTAAGCTCACCACACCCAAT
AACTGATGAGGGCTTGGTTATTGTTGAGGAGGACTTTGAGGTTTTGAAAAAATGTGCTTCAGTCTGTCCAACTGAAGCAA
TTGTAGTTGATGAGGAGAAGAAGGAAGTAAGAATGTGTATCGTCTGTGGAGCTTGTACTGTAGCCTGTCCAACAGGAGCT
TTAAAGCTTGGTAAGATAGAACATAATGGTAAGGAATACAACAGAATTGAATTCAGCCCTTACTTATGTGATAAGTGTGG
CAAATGTGTAGAAGTCTGCCCAATGAAGACATTAAGATTATCAAGAGGCAAATTACCATTGAAAGGATACTGTGTAATGT
GCTTACTCTGCTTAAGTGTAGCTGAAAAAGAAAAGAAAGGAAAAAAGGTTTTGGAGTTAAGATAA

Upstream 100 bases:

>100_bases
ACAACCGAACCCATTTGGGAGGTTGTGAGCTCTCTCCCTCTATGCAGGGGGAATTCGCTAAAATCCTTTTTTGGGATTTT
AGCGTATAATTTTTAGGAGG

Downstream 100 bases:

>100_bases
ATTAAAAAAGGGGTGAATCCCTTATGGTAAAAGTTGTTAGAAATGTTGTCTGTCCGTTCTGTGGGACATTATGTGATGAC
TTAGAGATTTTAGTTGAAGA

Product: polyferredoxin MvhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRLMSITIQKDACLVCYACQAECPTKAIDIDSFKVCNLCMECVKVCPTGALVEEEIEVNGKKLKRVNYLAHKCEKCGQCA
EACPIGIKKVDDDFPYSKGHCVLCQKCIDVCPIEIISLPGVIDKPKKEIKPPKEPIAVTDACVGCGICVPECPVNAITLE
NNKAVIDKSKCIYCSICAQTCPWNAIFVAGKIPKKRRKEVKKFEVNAEKCIYCLKCVEVCPGDMIKVDEENLIVIPPKSC
PACKLCVNICPVDALDLEVKLSSPHPITDEGLVIVEEDFEVLKKCASVCPTEAIVVDEEKKEVRMCIVCGACTVACPTGA
LKLGKIEHNGKEYNRIEFSPYLCDKCGKCVEVCPMKTLRLSRGKLPLKGYCVMCLLCLSVAEKEKKGKKVLELR

Sequences:

>Translated_394_residues
MRLMSITIQKDACLVCYACQAECPTKAIDIDSFKVCNLCMECVKVCPTGALVEEEIEVNGKKLKRVNYLAHKCEKCGQCA
EACPIGIKKVDDDFPYSKGHCVLCQKCIDVCPIEIISLPGVIDKPKKEIKPPKEPIAVTDACVGCGICVPECPVNAITLE
NNKAVIDKSKCIYCSICAQTCPWNAIFVAGKIPKKRRKEVKKFEVNAEKCIYCLKCVEVCPGDMIKVDEENLIVIPPKSC
PACKLCVNICPVDALDLEVKLSSPHPITDEGLVIVEEDFEVLKKCASVCPTEAIVVDEEKKEVRMCIVCGACTVACPTGA
LKLGKIEHNGKEYNRIEFSPYLCDKCGKCVEVCPMKTLRLSRGKLPLKGYCVMCLLCLSVAEKEKKGKKVLELR
>Mature_394_residues
MRLMSITIQKDACLVCYACQAECPTKAIDIDSFKVCNLCMECVKVCPTGALVEEEIEVNGKKLKRVNYLAHKCEKCGQCA
EACPIGIKKVDDDFPYSKGHCVLCQKCIDVCPIEIISLPGVIDKPKKEIKPPKEPIAVTDACVGCGICVPECPVNAITLE
NNKAVIDKSKCIYCSICAQTCPWNAIFVAGKIPKKRRKEVKKFEVNAEKCIYCLKCVEVCPGDMIKVDEENLIVIPPKSC
PACKLCVNICPVDALDLEVKLSSPHPITDEGLVIVEEDFEVLKKCASVCPTEAIVVDEEKKEVRMCIVCGACTVACPTGA
LKLGKIEHNGKEYNRIEFSPYLCDKCGKCVEVCPMKTLRLSRGKLPLKGYCVMCLLCLSVAEKEKKGKKVLELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 10 4Fe-4S ferredoxin-type domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VHUB_METJA (Q58593)

Other databases:

- EMBL:   L77117
- PIR:   H64448
- RefSeq:   NP_248188.1
- ProteinModelPortal:   Q58593
- SMR:   Q58593
- GeneID:   1452089
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1193
- NMPDR:   fig|243232.1.peg.1225
- TIGR:   MJ1193
- HOGENOM:   HBG540397
- OMA:   NACAKAC
- ProtClustDB:   CLSK876490
- BioCyc:   MJAN243232:MJ_1193-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900

Pfam domain/function: PF00037 Fer4

EC number: NA

Molecular weight: Translated: 43343; Mature: 43343

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
11.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
13.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMSITIQKDACLVCYACQAECPTKAIDIDSFKVCNLCMECVKVCPTGALVEEEIEVNG
CCEEEEEEECCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEHHHHHCCC
KKLKRVNYLAHKCEKCGQCAEACPIGIKKVDDDFPYSKGHCVLCQKCIDVCPIEIISLPG
HHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHCCEEEEECCC
VIDKPKKEIKPPKEPIAVTDACVGCGICVPECPVNAITLENNKAVIDKSKCIYCSICAQT
CCCCCHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEECCC
CPWNAIFVAGKIPKKRRKEVKKFEVNAEKCIYCLKCVEVCPGDMIKVDEENLIVIPPKSC
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCC
PACKLCVNICPVDALDLEVKLSSPHPITDEGLVIVEEDFEVLKKCASVCPTEAIVVDEEK
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCC
KEVRMCIVCGACTVACPTGALKLGKIEHNGKEYNRIEFSPYLCDKCGKCVEVCPMKTLRL
CCEEEEEEECCCCEECCCCCEEECEEECCCCCCCEEECCHHHHHHHCCHHHHCCCHHHHH
SRGKLPLKGYCVMCLLCLSVAEKEKKGKKVLELR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MRLMSITIQKDACLVCYACQAECPTKAIDIDSFKVCNLCMECVKVCPTGALVEEEIEVNG
CCEEEEEEECCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEHHHHHCCC
KKLKRVNYLAHKCEKCGQCAEACPIGIKKVDDDFPYSKGHCVLCQKCIDVCPIEIISLPG
HHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHCCEEEEECCC
VIDKPKKEIKPPKEPIAVTDACVGCGICVPECPVNAITLENNKAVIDKSKCIYCSICAQT
CCCCCHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEECCC
CPWNAIFVAGKIPKKRRKEVKKFEVNAEKCIYCLKCVEVCPGDMIKVDEENLIVIPPKSC
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCC
PACKLCVNICPVDALDLEVKLSSPHPITDEGLVIVEEDFEVLKKCASVCPTEAIVVDEEK
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCC
KEVRMCIVCGACTVACPTGALKLGKIEHNGKEYNRIEFSPYLCDKCGKCVEVCPMKTLRL
CCEEEEEEECCCCEECCCCCEEECEEECCCCCCCEEECCHHHHHHHCCHHHHCCCHHHHH
SRGKLPLKGYCVMCLLCLSVAEKEKKGKKVLELR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Iron-Sulfur; Iron-Sulfur; Iron-Sulfur; Iron-Sulfur; Iron-Sulfur; Iron-Sulfur; Iron-Sulfur; Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087