Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669362

Identifier: 15669362

GI number: 15669362

Start: 1111782

End: 1112066

Strand: Direct

Name: 15669362

Synonym: MJ1173

Alternate gene names: NA

Gene position: 1111782-1112066 (Clockwise)

Preceding gene: 15669361

Following gene: 15669367

Centisome position: 66.77

GC content: 25.61

Gene sequence:

>285_bases
ATGTATGAAATCGAAATAATGCCTTCATTGGATAAAATACTTCAAAAACTTTCAAAGAGAGACAAAAAGAAATTAAAAGC
AATATTAAAGAAAATGGAAGAGATTACTCAAAATCCACACCATTATAAAAACCTAAGACATCCTTTAAATGATTTTAAAA
GAGTTCATATCGATAAAAGCTTTGTTCTTGTTTTCACCGTTGATGAGAATAATAAAACAGTTATTTTCGTTGATTTTGAC
CATCATGACAACATTTATAAAAAGAAAAAGCTATTTAAAGATTAA

Upstream 100 bases:

>100_bases
ACCAGAATATATTGAAAAAATTAGAAACATTATGAAAAATGAAAAACCTATATACATTGGCTCTATTGAAAATCTAAAAA
AGAGATATTTAGGTGAATAA

Downstream 100 bases:

>100_bases
CTCTTAAGTTTATTTAATCTTCTCTCCCAAAGAAGCCCTTACTAACCCATCAAACAATGGATGTGGTTTGTTAGGTCTTG
ATTTAAACTCTGGATGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MYEIEIMPSLDKILQKLSKRDKKKLKAILKKMEEITQNPHHYKNLRHPLNDFKRVHIDKSFVLVFTVDENNKTVIFVDFD
HHDNIYKKKKLFKD

Sequences:

>Translated_94_residues
MYEIEIMPSLDKILQKLSKRDKKKLKAILKKMEEITQNPHHYKNLRHPLNDFKRVHIDKSFVLVFTVDENNKTVIFVDFD
HHDNIYKKKKLFKD
>Mature_94_residues
MYEIEIMPSLDKILQKLSKRDKKKLKAILKKMEEITQNPHHYKNLRHPLNDFKRVHIDKSFVLVFTVDENNKTVIFVDFD
HHDNIYKKKKLFKD

Specific function: Unknown

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.mazei MM2549

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1173_METJA (Q58573)

Other databases:

- EMBL:   L77117
- PIR:   D64446
- RefSeq:   NP_248167.1
- ProteinModelPortal:   Q58573
- SMR:   Q58573
- GeneID:   1452071
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1173
- NMPDR:   fig|243232.1.peg.1204
- TIGR:   MJ1173
- HOGENOM:   HBG546038
- OMA:   NENTNTV
- ProtClustDB:   CLSK876484
- BioCyc:   MJAN243232:MJ_1173-MONOMER
- InterPro:   IPR004386
- InterPro:   IPR007712
- TIGRFAMs:   TIGR00053

Pfam domain/function: PF05016 Plasmid_stabil

EC number: NA

Molecular weight: Translated: 11451; Mature: 11451

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEIEIMPSLDKILQKLSKRDKKKLKAILKKMEEITQNPHHYKNLRHPLNDFKRVHIDKS
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHEEECCCC
FVLVFTVDENNKTVIFVDFDHHDNIYKKKKLFKD
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCC
>Mature Secondary Structure
MYEIEIMPSLDKILQKLSKRDKKKLKAILKKMEEITQNPHHYKNLRHPLNDFKRVHIDKS
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHEEECCCC
FVLVFTVDENNKTVIFVDFDHHDNIYKKKKLFKD
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087