Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669350

Identifier: 15669350

GI number: 15669350

Start: 1102126

End: 1102629

Strand: Direct

Name: 15669350

Synonym: MJ1161

Alternate gene names: NA

Gene position: 1102126-1102629 (Clockwise)

Preceding gene: 15669349

Following gene: 15669352

Centisome position: 66.19

GC content: 29.96

Gene sequence:

>504_bases
ATGAGAGATAATATACGTAGTATTAATAAACTGTTAATATACTTAGTATTAATTTTGTCAGCCATGTTTTTGTGTCAAAA
TGTTTTTGCAGAGGACTATAATGCCATAGAAATAACTGTAAAGAATATTAGTAGTGGGGAGATACTTTATCAAAAAATAT
TCCCAAAAGATGAAGCTTTTAGTGACTATCAAGTTATAAACGGATTTACTATAGATATACATTACAATCCAAATTATCCA
GGTATGGTGTATAAAGTACATCAGAGTAATAATCACTTTATTTTTAATGTTTCTGGGGAATTAAATTGGGGTTCTTATCA
ACAAAGTGGAGATATCGCATGTATTGTTGACGTCATTCATTACGATTTCCCACCACCTTCAAATACAACCTCAAATACAA
CTACAACATCCTCATCATCAACAAAAGCCCCAATTCCATTAAGCGTTTATTTAGCCATAACTGCTTTCTTTACCTATATC
ATATATAGAAAATCAAAAACTTAA

Upstream 100 bases:

>100_bases
ATATTAAATTAAGTTCTAAATTCAAATGAAAACATTTTTAAATGAGCAATTAATTAAATAAATTTTATTTTCATGATATT
GTATATCTACTGGTGAAAAT

Downstream 100 bases:

>100_bases
TTTTTTATTTTAAAATCCAGCGAAATCTTCTAAAACAACCATATTCTTTTTTGTATCATAAACAAAATAACTCTATAACC
TTATAAGTCTAAAGGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP
GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI
IYRKSKT

Sequences:

>Translated_167_residues
MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP
GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI
IYRKSKT
>Mature_167_residues
MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP
GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI
IYRKSKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1161_METJA (Q58561)

Other databases:

- EMBL:   L77117
- PIR:   H64444
- RefSeq:   NP_248155.1
- GeneID:   1452059
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1161
- NMPDR:   fig|243232.1.peg.1192
- TIGR:   MJ1161
- OMA:   NAIEITV
- ProtClustDB:   CLSK2517696
- BioCyc:   MJAN243232:MJ_1161-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18977; Mature: 18977

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe1d5f0c)-; HASH(0xc8d5a7c)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCC
SDYQVINGFTIDIHYNPNYPGMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIH
CCEEEECCEEEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEE
YDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYIIYRKSKT
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCH
>Mature Secondary Structure
MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCC
SDYQVINGFTIDIHYNPNYPGMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIH
CCEEEECCEEEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEE
YDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYIIYRKSKT
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087