| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669350
Identifier: 15669350
GI number: 15669350
Start: 1102126
End: 1102629
Strand: Direct
Name: 15669350
Synonym: MJ1161
Alternate gene names: NA
Gene position: 1102126-1102629 (Clockwise)
Preceding gene: 15669349
Following gene: 15669352
Centisome position: 66.19
GC content: 29.96
Gene sequence:
>504_bases ATGAGAGATAATATACGTAGTATTAATAAACTGTTAATATACTTAGTATTAATTTTGTCAGCCATGTTTTTGTGTCAAAA TGTTTTTGCAGAGGACTATAATGCCATAGAAATAACTGTAAAGAATATTAGTAGTGGGGAGATACTTTATCAAAAAATAT TCCCAAAAGATGAAGCTTTTAGTGACTATCAAGTTATAAACGGATTTACTATAGATATACATTACAATCCAAATTATCCA GGTATGGTGTATAAAGTACATCAGAGTAATAATCACTTTATTTTTAATGTTTCTGGGGAATTAAATTGGGGTTCTTATCA ACAAAGTGGAGATATCGCATGTATTGTTGACGTCATTCATTACGATTTCCCACCACCTTCAAATACAACCTCAAATACAA CTACAACATCCTCATCATCAACAAAAGCCCCAATTCCATTAAGCGTTTATTTAGCCATAACTGCTTTCTTTACCTATATC ATATATAGAAAATCAAAAACTTAA
Upstream 100 bases:
>100_bases ATATTAAATTAAGTTCTAAATTCAAATGAAAACATTTTTAAATGAGCAATTAATTAAATAAATTTTATTTTCATGATATT GTATATCTACTGGTGAAAAT
Downstream 100 bases:
>100_bases TTTTTTATTTTAAAATCCAGCGAAATCTTCTAAAACAACCATATTCTTTTTTGTATCATAAACAAAATAACTCTATAACC TTATAAGTCTAAAGGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI IYRKSKT
Sequences:
>Translated_167_residues MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI IYRKSKT >Mature_167_residues MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAFSDYQVINGFTIDIHYNPNYP GMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIHYDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYI IYRKSKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1161_METJA (Q58561)
Other databases:
- EMBL: L77117 - PIR: H64444 - RefSeq: NP_248155.1 - GeneID: 1452059 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1161 - NMPDR: fig|243232.1.peg.1192 - TIGR: MJ1161 - OMA: NAIEITV - ProtClustDB: CLSK2517696 - BioCyc: MJAN243232:MJ_1161-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18977; Mature: 18977
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe1d5f0c)-; HASH(0xc8d5a7c)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCC SDYQVINGFTIDIHYNPNYPGMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIH CCEEEECCEEEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEE YDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYIIYRKSKT CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCH >Mature Secondary Structure MRDNIRSINKLLIYLVLILSAMFLCQNVFAEDYNAIEITVKNISSGEILYQKIFPKDEAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCC SDYQVINGFTIDIHYNPNYPGMVYKVHQSNNHFIFNVSGELNWGSYQQSGDIACIVDVIH CCEEEECCEEEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEE YDFPPPSNTTSNTTTTSSSSTKAPIPLSVYLAITAFFTYIIYRKSKT CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087