| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is glmM
Identifier: 15669288
GI number: 15669288
Start: 1040527
End: 1041873
Strand: Direct
Name: glmM
Synonym: MJ1100
Alternate gene names: 15669288
Gene position: 1040527-1041873 (Clockwise)
Preceding gene: 15669281
Following gene: 15669289
Centisome position: 62.5
GC content: 33.48
Gene sequence:
>1347_bases ATGGGAAGATTATTTGGGACTTCTGGAATAAGAATGAAAAATTTATCTCCAAAAATTGCCTATAAAGTTGGATTAGCAGT GGCAAAAAAATATAAGAAAGTTGTAGTTGGGAGAGATACAAGGACTACAGGAAAATTAATTGAAACTGCATTAACAGCAG GAATCTTAAATGGTGGGGGGGAAGTTACAACTATAAACATAGTCCCAACACCAGTTTTAGGTTTTAATGCACGAAATTAT GATGTTGGCATAATGATTACTGCCTCTCACAACCCTCCAGAATACAATGGAATAAAGCTCTTCAATAAAAATGGTTTAGC TTTTAATAAAAAAGAAGAGGATGAGATAGAGGAGATTATATTTAAAGAAGATTTTATTGAAGTTGAGTGGCATAGTGTTG GCGAGATTTGGGAAGATAGCAGGGCGATAAGGAACTATATGGAACATATTCTTAAAAATGTTGAGATAAATGAAAAATTT AATGTGGTTATTGATTGTGCAAACGCCTCTGCTTGTTTAGTATCTCCATATTTATTTACAGATTTAGGATGTCATGTTAT CTCAGTTAATAGTCACATGGATGGGAGATTTATTGGTAGATTACCAGAGCCAGATGAAAAAAACCTCAAAAAAACTATGG ATATGATTAAAGGCCTAAATATGAGTGGAGATAACTACATTGGCATAGCACACGATGGAGATGCAGATAGAATGGTAGCA ATAGATGAAAAGGGAAGATTAGCTGATTTTGATAAGCTATTAGCTGCTTTCTCAAGATATATGGTTGAAAAAACTGGAAA CAAAAAGATTGTTACAACAGTTGATGCTTCAATGATTATTGATGAGTATTTAAAAGATTTAGATGTTGAGATAATAAGAA CAAAAGTTGGGGATGTGGCGGTTGCTGAAGAGATGATTAAAAACTCTGCTGTTTTTGGTGGAGAGCCAAGTGGAACGTGG ATTCATGCTGATATCCATCTAACTCCAGATGGAATTTTGAGTGGGCTGAGAGTTTTAGAGATGTTAGATTTCTATAACAA AAAATTATATGAAATATTGGATGAAATCCCATCTTATGTAAATTTAAGGGAGAAGATTCCATGTGAAGATGATAAAAAAG AAAAAGTAATGAGTTATGTTATTGAAAATGGAGAGAGTTTATTTAAAACAGTTCCTGAGACCGTTGATGGAGCAAGATTT AACTTAGAGAATGGATGGGTTTTAATAAGACCTTCGGGAACTGAGCCATACATAAGGGTTAGAGTTGAGGCAAAAAATAA CAAAGATGCTAAAGAGTTGTTAGAAAAAGGGATAAAGTTAGTTAAAGAAGCTTTAAGTGCTTTATAA
Upstream 100 bases:
>100_bases GAACACTTGAACGTCTTCTTATAGAAGGCGTTCATTAATACCTCAATTATTACAAAATGTTTTGATTATTATCTTTAATG ATTATAGCAAAGGTGATTAA
Downstream 100 bases:
>100_bases AACTATTTTTAAATTTTGGTGATATAAATGGATGCCATAATATTATGTGCAGGGAAAGGGGAGAGATTAAGACCTCTAAC AGAGAACAGACCAAAACCAA
Product: phosphomannomutase PmmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MGRLFGTSGIRMKNLSPKIAYKVGLAVAKKYKKVVVGRDTRTTGKLIETALTAGILNGGGEVTTINIVPTPVLGFNARNY DVGIMITASHNPPEYNGIKLFNKNGLAFNKKEEDEIEEIIFKEDFIEVEWHSVGEIWEDSRAIRNYMEHILKNVEINEKF NVVIDCANASACLVSPYLFTDLGCHVISVNSHMDGRFIGRLPEPDEKNLKKTMDMIKGLNMSGDNYIGIAHDGDADRMVA IDEKGRLADFDKLLAAFSRYMVEKTGNKKIVTTVDASMIIDEYLKDLDVEIIRTKVGDVAVAEEMIKNSAVFGGEPSGTW IHADIHLTPDGILSGLRVLEMLDFYNKKLYEILDEIPSYVNLREKIPCEDDKKEKVMSYVIENGESLFKTVPETVDGARF NLENGWVLIRPSGTEPYIRVRVEAKNNKDAKELLEKGIKLVKEALSAL
Sequences:
>Translated_448_residues MGRLFGTSGIRMKNLSPKIAYKVGLAVAKKYKKVVVGRDTRTTGKLIETALTAGILNGGGEVTTINIVPTPVLGFNARNY DVGIMITASHNPPEYNGIKLFNKNGLAFNKKEEDEIEEIIFKEDFIEVEWHSVGEIWEDSRAIRNYMEHILKNVEINEKF NVVIDCANASACLVSPYLFTDLGCHVISVNSHMDGRFIGRLPEPDEKNLKKTMDMIKGLNMSGDNYIGIAHDGDADRMVA IDEKGRLADFDKLLAAFSRYMVEKTGNKKIVTTVDASMIIDEYLKDLDVEIIRTKVGDVAVAEEMIKNSAVFGGEPSGTW IHADIHLTPDGILSGLRVLEMLDFYNKKLYEILDEIPSYVNLREKIPCEDDKKEKVMSYVIENGESLFKTVPETVDGARF NLENGWVLIRPSGTEPYIRVRVEAKNNKDAKELLEKGIKLVKEALSAL >Mature_447_residues GRLFGTSGIRMKNLSPKIAYKVGLAVAKKYKKVVVGRDTRTTGKLIETALTAGILNGGGEVTTINIVPTPVLGFNARNYD VGIMITASHNPPEYNGIKLFNKNGLAFNKKEEDEIEEIIFKEDFIEVEWHSVGEIWEDSRAIRNYMEHILKNVEINEKFN VVIDCANASACLVSPYLFTDLGCHVISVNSHMDGRFIGRLPEPDEKNLKKTMDMIKGLNMSGDNYIGIAHDGDADRMVAI DEKGRLADFDKLLAAFSRYMVEKTGNKKIVTTVDASMIIDEYLKDLDVEIIRTKVGDVAVAEEMIKNSAVFGGEPSGTWI HADIHLTPDGILSGLRVLEMLDFYNKKLYEILDEIPSYVNLREKIPCEDDKKEKVMSYVIENGESLFKTVPETVDGARFN LENGWVLIRPSGTEPYIRVRVEAKNNKDAKELLEKGIKLVKEALSAL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=473, Percent_Identity=30.0211416490486, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1788361, Length=431, Percent_Identity=25.9860788863109, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_METJA (Q58500)
Other databases:
- EMBL: EU430076 - EMBL: L77117 - PIR: C64437 - RefSeq: NP_248093.1 - ProteinModelPortal: Q58500 - GeneID: 1451997 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1100 - NMPDR: fig|243232.1.peg.1130 - TIGR: MJ1100 - HOGENOM: HBG644964 - OMA: WIFPKIS - ProtClustDB: CLSK2517686 - BioCyc: MJAN243232:MJ_1100-MONOMER - HAMAP: MF_01554_A - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 50099; Mature: 49968
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 89-89
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLFGTSGIRMKNLSPKIAYKVGLAVAKKYKKVVVGRDTRTTGKLIETALTAGILNGGG CCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCC EVTTINIVPTPVLGFNARNYDVGIMITASHNPPEYNGIKLFNKNGLAFNKKEEDEIEEII CEEEEEEECCCEECCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCEECCCCHHHHHHHH FKEDFIEVEWHSVGEIWEDSRAIRNYMEHILKNVEINEKFNVVIDCANASACLVSPYLFT HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHH DLGCHVISVNSHMDGRFIGRLPEPDEKNLKKTMDMIKGLNMSGDNYIGIAHDGDADRMVA CCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE IDEKGRLADFDKLLAAFSRYMVEKTGNKKIVTTVDASMIIDEYLKDLDVEIIRTKVGDVA ECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEEHHCCCHH VAEEMIKNSAVFGGEPSGTWIHADIHLTPDGILSGLRVLEMLDFYNKKLYEILDEIPSYV HHHHHHHCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLREKIPCEDDKKEKVMSYVIENGESLFKTVPETVDGARFNLENGWVLIRPSGTEPYIRV CHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCHHHCCCCEEEECCCEEEEEECCCCCEEEE RVEAKNNKDAKELLEKGIKLVKEALSAL EEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GRLFGTSGIRMKNLSPKIAYKVGLAVAKKYKKVVVGRDTRTTGKLIETALTAGILNGGG CCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCC EVTTINIVPTPVLGFNARNYDVGIMITASHNPPEYNGIKLFNKNGLAFNKKEEDEIEEII CEEEEEEECCCEECCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCEECCCCHHHHHHHH FKEDFIEVEWHSVGEIWEDSRAIRNYMEHILKNVEINEKFNVVIDCANASACLVSPYLFT HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHH DLGCHVISVNSHMDGRFIGRLPEPDEKNLKKTMDMIKGLNMSGDNYIGIAHDGDADRMVA CCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE IDEKGRLADFDKLLAAFSRYMVEKTGNKKIVTTVDASMIIDEYLKDLDVEIIRTKVGDVA ECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEEHHCCCHH VAEEMIKNSAVFGGEPSGTWIHADIHLTPDGILSGLRVLEMLDFYNKKLYEILDEIPSYV HHHHHHHCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLREKIPCEDDKKEKVMSYVIENGESLFKTVPETVDGARFNLENGWVLIRPSGTEPYIRV CHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCHHHCCCCEEEECCCEEEEEECCCCCEEEE RVEAKNNKDAKELLEKGIKLVKEALSAL EEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087