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The map label for this gene is cbiM

Identifier: 15669279

GI number: 15669279

Start: 1029117

End: 1029818

Strand: Reverse

Name: cbiM

Synonym: MJ1091

Alternate gene names: 15669279

Gene position: 1029818-1029117 (Counterclockwise)

Preceding gene: 15669282

Following gene: 15669278

Centisome position: 61.85

GC content: 39.89

Gene sequence:

>702_bases
TTGCACATAATGGAGGGATATCTCCCACCAATGTGGTGTGCAGTTTGGTGGGTTCTCTCAGGTATTGTAATTGCCTACGG
TATTGTTAAATTAAAAAAACTACTTGAAGAAAGTCCAGAAATGAAGCCATTAGTTGCAATATCTGGGGCATACATGTTTA
TATTGAGTTCCTTAAAGATGCCATCAGTTACTGGAAGTTGTTCTCACCCATGTGGTAACGGTTTAGGGGCAGTGTTATTC
GGTGTTCCAATAACTGCTGTGTTAGCGGCTATTGTTCTATTGTTCCAAGCGTTATTCTTAGCTCATGGAGGTTTAACAAC
ACTTGGAGCTAACGATTTCTCAATGGGTATTGTTGGACCTGCCGCCGCAGTGATTGTATATAGATTATGTATGAAGGCAG
GTTTAAGCTCTACAGTTGGAATATTCTTCGCGGCATTGTTTGGAGACTGGCTAACTTATGTCACAACTGCTGTTCAGTTA
GCACTTGCATTCCCAATCCCTTCATTCACAGCGGCATTTACAAAATTCATTGTAATTTATGCATATACACAAGTTCCATT
GGCAATTGCAGAAGGTATATTGACAGTTATAATATGGGACTACATTAAGAAATTAAGACCTGACTTATTGTTGAAGTTAG
GAGTAGTTCCAGAAGAGGAGTTAAAACCATATTTAACCCCCTCTCCTGCAGGAGGTGAGTAA

Upstream 100 bases:

>100_bases
AAGTTTATTTTATTAATAATAAAATACCGTTAAATTTATATAAGATAAAGAGTACTATAAATGTGTTAAGTTTTTTTGAA
TTATATTCAGGGGTGATAAC

Downstream 100 bases:

>100_bases
ATGGAAACAAAACATATAATTTTATTGGCAATAGTTGCAATAATTATTGCCTTACCTTTAATAATCTATGCAGGTAAAGG
TGAAGAAGAAGGATACTTTG

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MHIMEGYLPPMWCAVWWVLSGIVIAYGIVKLKKLLEESPEMKPLVAISGAYMFILSSLKMPSVTGSCSHPCGNGLGAVLF
GVPITAVLAAIVLLFQALFLAHGGLTTLGANDFSMGIVGPAAAVIVYRLCMKAGLSSTVGIFFAALFGDWLTYVTTAVQL
ALAFPIPSFTAAFTKFIVIYAYTQVPLAIAEGILTVIIWDYIKKLRPDLLLKLGVVPEEELKPYLTPSPAGGE

Sequences:

>Translated_233_residues
MHIMEGYLPPMWCAVWWVLSGIVIAYGIVKLKKLLEESPEMKPLVAISGAYMFILSSLKMPSVTGSCSHPCGNGLGAVLF
GVPITAVLAAIVLLFQALFLAHGGLTTLGANDFSMGIVGPAAAVIVYRLCMKAGLSSTVGIFFAALFGDWLTYVTTAVQL
ALAFPIPSFTAAFTKFIVIYAYTQVPLAIAEGILTVIIWDYIKKLRPDLLLKLGVVPEEELKPYLTPSPAGGE
>Mature_233_residues
MHIMEGYLPPMWCAVWWVLSGIVIAYGIVKLKKLLEESPEMKPLVAISGAYMFILSSLKMPSVTGSCSHPCGNGLGAVLF
GVPITAVLAAIVLLFQALFLAHGGLTTLGANDFSMGIVGPAAAVIVYRLCMKAGLSSTVGIFFAALFGDWLTYVTTAVQL
ALAFPIPSFTAAFTKFIVIYAYTQVPLAIAEGILTVIIWDYIKKLRPDLLLKLGVVPEEELKPYLTPSPAGGE

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBIM_METJA (Q58491)

Other databases:

- EMBL:   L77117
- PIR:   B64436
- RefSeq:   NP_248084.1
- ProteinModelPortal:   Q58491
- GeneID:   1451987
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1091
- NMPDR:   fig|243232.1.peg.1121
- TIGR:   MJ1091
- HOGENOM:   HBG662717
- OMA:   ANVFSMG
- ProtClustDB:   PRK08319
- BioCyc:   MJAN243232:MJ_1091-MONOMER
- InterPro:   IPR002751
- InterPro:   IPR018024
- TIGRFAMs:   TIGR00123

Pfam domain/function: PF01891 CbiM

EC number: NA

Molecular weight: Translated: 24914; Mature: 24914

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdf0b0e4)-; HASH(0xe17fdf4)-; HASH(0xd847550)-; HASH(0xe225e2c)-; HASH(0xda56994)-; HASH(0xda36dfc)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGYLPPMWCAVWWVLSGIVIAYGIVKLKKLLEESPEMKPLVAISGAYMFILSSLKM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PSVTGSCSHPCGNGLGAVLFGVPITAVLAAIVLLFQALFLAHGGLTTLGANDFSMGIVGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AAAVIVYRLCMKAGLSSTVGIFFAALFGDWLTYVTTAVQLALAFPIPSFTAAFTKFIVIY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AYTQVPLAIAEGILTVIIWDYIKKLRPDLLLKLGVVPEEELKPYLTPSPAGGE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCH
>Mature Secondary Structure
MHIMEGYLPPMWCAVWWVLSGIVIAYGIVKLKKLLEESPEMKPLVAISGAYMFILSSLKM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PSVTGSCSHPCGNGLGAVLFGVPITAVLAAIVLLFQALFLAHGGLTTLGANDFSMGIVGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AAAVIVYRLCMKAGLSSTVGIFFAALFGDWLTYVTTAVQLALAFPIPSFTAAFTKFIVIY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AYTQVPLAIAEGILTVIIWDYIKKLRPDLLLKLGVVPEEELKPYLTPSPAGGE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087