| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is wcaA [C]
Identifier: 15669246
GI number: 15669246
Start: 996509
End: 997381
Strand: Direct
Name: wcaA [C]
Synonym: MJ1057
Alternate gene names: 15669246
Gene position: 996509-997381 (Clockwise)
Preceding gene: 15669245
Following gene: 15669247
Centisome position: 59.85
GC content: 23.91
Gene sequence:
>873_bases ATGGTGGGAGAGATGGATAAGCCATTAGTTTCAGTTGTAATGGCAACATACAACGAACCAGAAAAATATTTAAAGGAATC TATTGAGTCAATTTYAAATCAAACATYTAAAGATTTTGAMTTTATAATCGTTTTAGATAATCCAAATAATAAAAAAGCAG AGGAAATTATTAAAGAATATCAACAGAAAGATAAAAGAATTATTTTTATAAAAAATGAAAGAAATTTAGGTAGAGGAGCC AGTAGAAATAAAGCTGTTAATATAGCAAGGGGGAAGTATATTGCCATATTAGACGCTGATGATATTGCATTACCTAAAAG ATTAGAAAAACAATTTAAATATATGGAAAATAATAGAGACATTGATTTATTGTTTAGCTGGGTTTATTTTATTGATGAAA ATGGAAATATTTTAAAAGAGTTTAAGCCAGAAAAATATAAATTTAAAGAAATTAAAAAATATTTTTTCAAAGAACATTTA ACTGTTCATCCATCTATGATGGTAAAGAGTAAAATCTTAAAGAAATTAAAATACGATGAGAAATTAATTAGGTCTCAAGA CTACGATTTTTGGATTAGATGTATAGCCAATGATTACAAATTTGACATAATTGAGGAATTTTTATTAAAATATAGAATTC CAAATAGAGACAATTATTTAAGCAGAATCAAAAAACAAAAATTATATTCTTACTATACCTTAAAAACACATTGGAAAAAT AAAAAACATTTCTGCAACAATGTTTATTTTTGGAAAGTATTTTTTTATAGTTTGGTAGTATATTTATTTATCGTATTAAC GCCAACATTTATTTTAAAGATTTTAATCGATATAAAAGATAAAAAGACTGAAATTAGTACGAAAGGACATTAA
Upstream 100 bases:
>100_bases TTGATTATGAGTTATATGAATTCTTTAAAGAGAAAGTTTTTAAAAATAAAGAACAAAGTTTGTATAGGAATTATTTGATA AGGTTGTTTTTGTTTATTAA
Downstream 100 bases:
>100_bases AGGTGGAATTATGGTTAAAATCTTAGGAGTAAAATATTTTTTACATGATAGTGGTGTTTTTTATATTGATACAAAGAATA AGGAGATTTTTGGAATCTTA
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MVGEMDKPLVSVVMATYNEPEKYLKESIESIXNQTXKDFXFIIVLDNPNNKKAEEIIKEYQQKDKRIIFIKNERNLGRGA SRNKAVNIARGKYIAILDADDIALPKRLEKQFKYMENNRDIDLLFSWVYFIDENGNILKEFKPEKYKFKEIKKYFFKEHL TVHPSMMVKSKILKKLKYDEKLIRSQDYDFWIRCIANDYKFDIIEEFLLKYRIPNRDNYLSRIKKQKLYSYYTLKTHWKN KKHFCNNVYFWKVFFYSLVVYLFIVLTPTFILKILIDIKDKKTEISTKGH
Sequences:
>Translated_290_residues MVGEMDKPLVSVVMATYNEPEKYLKESIESIXNQTXKDFXFIIVLDNPNNKKAEEIIKEYQQKDKRIIFIKNERNLGRGA SRNKAVNIARGKYIAILDADDIALPKRLEKQFKYMENNRDIDLLFSWVYFIDENGNILKEFKPEKYKFKEIKKYFFKEHL TVHPSMMVKSKILKKLKYDEKLIRSQDYDFWIRCIANDYKFDIIEEFLLKYRIPNRDNYLSRIKKQKLYSYYTLKTHWKN KKHFCNNVYFWKVFFYSLVVYLFIVLTPTFILKILIDIKDKKTEISTKGH >Mature_290_residues MVGEMDKPLVSVVMATYNEPEKYLKESIESIXNQTXKDFXFIIVLDNPNNKKAEEIIKEYQQKDKRIIFIKNERNLGRGA SRNKAVNIARGKYIAILDADDIALPKRLEKQFKYMENNRDIDLLFSWVYFIDENGNILKEFKPEKYKFKEIKKYFFKEHL TVHPSMMVKSKILKKLKYDEKLIRSQDYDFWIRCIANDYKFDIIEEFLLKYRIPNRDNYLSRIKKQKLYSYYTLKTHWKN KKHFCNNVYFWKVFFYSLVVYLFIVLTPTFILKILIDIKDKKTEISTKGH
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family
Homologues:
Organism=Escherichia coli, GI1788372, Length=192, Percent_Identity=26.0416666666667, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1057_METJA (Q58457)
Other databases:
- EMBL: L77117 - PIR: H64431 - RefSeq: NP_248051.1 - ProteinModelPortal: Q58457 - GeneID: 1451954 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1057 - NMPDR: fig|243232.1.peg.1088 - TIGR: MJ1057 - HOGENOM: HBG495506 - OMA: AGNIELI - ProtClustDB: CLSK796710 - BioCyc: MJAN243232:MJ_1057-MONOMER - InterPro: IPR001173
Pfam domain/function: PF00535 Glycos_transf_2
EC number: NA
Molecular weight: Translated: 34940; Mature: 34940
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGEMDKPLVSVVMATYNEPEKYLKESIESIXNQTXKDFXFIIVLDNPNNKKAEEIIKEY CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH QQKDKRIIFIKNERNLGRGASRNKAVNIARGKYIAILDADDIALPKRLEKQFKYMENNRD HHCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCC IDLLFSWVYFIDENGNILKEFKPEKYKFKEIKKYFFKEHLTVHPSMMVKSKILKKLKYDE HHHHEEEHHEECCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLIRSQDYDFWIRCIANDYKFDIIEEFLLKYRIPNRDNYLSRIKKQKLYSYYTLKTHWKN HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHCCC KKHFCNNVYFWKVFFYSLVVYLFIVLTPTFILKILIDIKDKKTEISTKGH CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVGEMDKPLVSVVMATYNEPEKYLKESIESIXNQTXKDFXFIIVLDNPNNKKAEEIIKEY CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH QQKDKRIIFIKNERNLGRGASRNKAVNIARGKYIAILDADDIALPKRLEKQFKYMENNRD HHCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCC IDLLFSWVYFIDENGNILKEFKPEKYKFKEIKKYFFKEHLTVHPSMMVKSKILKKLKYDE HHHHEEEHHEECCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLIRSQDYDFWIRCIANDYKFDIIEEFLLKYRIPNRDNYLSRIKKQKLYSYYTLKTHWKN HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHCCC KKHFCNNVYFWKVFFYSLVVYLFIVLTPTFILKILIDIKDKKTEISTKGH CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087