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The map label for this gene is rps7p

Identifier: 15669236

GI number: 15669236

Start: 983161

End: 983736

Strand: Direct

Name: rps7p

Synonym: MJ1047

Alternate gene names: 15669236

Gene position: 983161-983736 (Clockwise)

Preceding gene: 15669235

Following gene: 15669237

Centisome position: 59.05

GC content: 34.38

Gene sequence:

>576_bases
TTGGAACTCGATGAAATTAAGGTATTTGGAAGATGGAGCACAAAGGATGTTGTTGTTAAAGACCCAGGTTTAAGAAACTA
CATAAACTTAACACCAATTTATGTTCCACACACTGCAGGAAGATACACAAAGAGACAGTTCGAAAAAGCAAAAATGAACA
TTGTTGAGAGATTAGTAAATAAAGTTATGAGAAGAGAAGAAAATACAGGTAAAAAATTAAAAGCATTAAAAATAGTTGAA
AATGCTTTTGAAATCATTGAAAAGAGAACAAAACAAAACCCAATTCAAGTTTTAGTAGATGCAATTGAAAACGCTGGACC
AAGAGAAGATACAACAAGAATTTCTTATGGAGGTATCGTCTATTTACAATCAGTTGATTGTTCATCATTGAGAAGAATTG
ATGTTGCTTTAAGAAACATTGCTCTTGGAGCATACATGGCTGCTCATAAAAGCAAGAAGCCAATTGAAGAGGCATTAGCT
GAAGAGATAATTGCAGCTGCAAGAGGAGACATGCAGAAAAGCTATGCAGTTAGAAAGAAAGAAGAGACAGAGAGAGTTGC
TCAGTCAGCAAGATAA

Upstream 100 bases:

>100_bases
GAGAGAATTAGTTAGAGGAAGACAGGAGAAAATCAAAAGATAAATTCTCTATATTTAAATTTATTAAAAATTTTGAAAGA
GTTGGAAATGAGGTGGTAAT

Downstream 100 bases:

>100_bases
ATTTACATGCCTTTTCAATATTACATCCAAACTTTATCTTAATAACCCAATAAGCTTTTAAACTTTTAACAAATTAATTA
ACTCAACAACTAAAAATAAG

Product: 30S ribosomal protein S7P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MELDEIKVFGRWSTKDVVVKDPGLRNYINLTPIYVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVE
NAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALA
EEIIAAARGDMQKSYAVRKKEETERVAQSAR

Sequences:

>Translated_191_residues
MELDEIKVFGRWSTKDVVVKDPGLRNYINLTPIYVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVE
NAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALA
EEIIAAARGDMQKSYAVRKKEETERVAQSAR
>Mature_191_residues
MELDEIKVFGRWSTKDVVVKDPGLRNYINLTPIYVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVE
NAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALA
EEIIAAARGDMQKSYAVRKKEETERVAQSAR

Specific function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center

COG id: COG0049

COG function: function code J; Ribosomal protein S7

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S7P family

Homologues:

Organism=Homo sapiens, GI13904870, Length=193, Percent_Identity=50.259067357513, Blast_Score=183, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17542204, Length=193, Percent_Identity=48.1865284974093, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322583, Length=188, Percent_Identity=51.5957446808511, Blast_Score=187, Evalue=1e-48,
Organism=Drosophila melanogaster, GI17647897, Length=193, Percent_Identity=50.7772020725389, Blast_Score=186, Evalue=9e-48,
Organism=Drosophila melanogaster, GI21357837, Length=193, Percent_Identity=48.7046632124352, Blast_Score=179, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS7_METJA (P54063)

Other databases:

- EMBL:   L77117
- PIR:   F64430
- RefSeq:   NP_248041.1
- ProteinModelPortal:   P54063
- SMR:   P54063
- GeneID:   1451944
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1047
- NMPDR:   fig|243232.1.peg.1078
- TIGR:   MJ1047
- HOGENOM:   HBG297325
- OMA:   PREETTR
- ProtClustDB:   PRK04027
- BioCyc:   MJAN243232:MJ_1047-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00480_A
- InterPro:   IPR000235
- InterPro:   IPR020606
- InterPro:   IPR005716
- Gene3D:   G3DSA:1.10.455.10
- PANTHER:   PTHR11205
- PANTHER:   PTHR11205:SF1
- TIGRFAMs:   TIGR01028

Pfam domain/function: PF00177 Ribosomal_S7; SSF47973 Ribosomal_S7

EC number: NA

Molecular weight: Translated: 21760; Mature: 21760

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00052 RIBOSOMAL_S7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDEIKVFGRWSTKDVVVKDPGLRNYINLTPIYVPHTAGRYTKRQFEKAKMNIVERLVN
CCCCCEEEEECCCCCCEEEECCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCEE
YLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALAEEIIAAARGDMQKSYAVRKK
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
EETERVAQSAR
HHHHHHHHCCC
>Mature Secondary Structure
MELDEIKVFGRWSTKDVVVKDPGLRNYINLTPIYVPHTAGRYTKRQFEKAKMNIVERLVN
CCCCCEEEEECCCCCCEEEECCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCEE
YLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALAEEIIAAARGDMQKSYAVRKK
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
EETERVAQSAR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087