| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669209
Identifier: 15669209
GI number: 15669209
Start: 950417
End: 951196
Strand: Direct
Name: 15669209
Synonym: MJ1020
Alternate gene names: NA
Gene position: 950417-951196 (Clockwise)
Preceding gene: 15669208
Following gene: 15669212
Centisome position: 57.08
GC content: 32.18
Gene sequence:
>780_bases ATGGGGAGAGATATGGACTTCGAAGAGCTAAATTCTCTACAAGGGATTCCAAAAATGATTTATGATGAACTAATTAAAAA TAAAAAGGTAAATACTTTTTTAAAAATGTCAAATATCATGGCTGTTGGTAGATTAGGCTACAATGACCATGGAAAAACAC ACGCTAAGATAGTGGCAAACAATGCAATAAAGATGCTAAAAATTTTATATAAAAAAGGGATAGAGCCAAGTTTTGTAAAA GACTGCAAAGGCAGTTTTGAAGATTCTTTAGTTATAACTCTTTTGGGAGCTTATTTGCATGATATTGGAAATTCAGTGCA TAGAGATATTCATCACTTACATTCAGCATATTTGGCTTTGGATATAGTTGAAAACATATTAAAAAAGTATTATAAAGAAG AGAAAGCTTATCAGATGACTACTGAGGTTTTACACGCTATTTATTCTCACAGTGAAGGAATTATGGGATTAACGATTGAA GCTGGAGTTATTGCCGTTGCAGATGGAACAGATATGACAAAGGGAAGGTCAAGAATTCCAATCTGTAAAAAATGCTATGA TATACATTCAGTTTCAGCGGCTTCAATTGAAAGAGTTGAAATAAAGGAGGGCGATGAGAAGCCAATACAAATTGAGGTAA TACTATCAAATGAAGCTGGGATATTCCAAATCCAAGAGGTTTTAGGAGAGAAAATAAAATGGAGTGGAATAAAAAATTAT GTCTCTGTATATGCAAGAGTTGAAAAAGAAAAACCTGTATTTGAAGAAATTACAATTTAA
Upstream 100 bases:
>100_bases AAATAAACTTCTAAAAAATATTTTTATTTTATTGCCTTGAAGGTTAATTTAATTTTAAATTTAAATTATTTTAATTAAAT TAAAAACAAGTTTTATCTAA
Downstream 100 bases:
>100_bases AAATTTTATAGTGTCTTTCAAAAATTCTTAAAATAATAAGACACTAATTATACGCTTCTTCTTTTTGATTTTTTTCTTCA TACCTCAGATTTTCTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MGRDMDFEELNSLQGIPKMIYDELIKNKKVNTFLKMSNIMAVGRLGYNDHGKTHAKIVANNAIKMLKILYKKGIEPSFVK DCKGSFEDSLVITLLGAYLHDIGNSVHRDIHHLHSAYLALDIVENILKKYYKEEKAYQMTTEVLHAIYSHSEGIMGLTIE AGVIAVADGTDMTKGRSRIPICKKCYDIHSVSAASIERVEIKEGDEKPIQIEVILSNEAGIFQIQEVLGEKIKWSGIKNY VSVYARVEKEKPVFEEITI
Sequences:
>Translated_259_residues MGRDMDFEELNSLQGIPKMIYDELIKNKKVNTFLKMSNIMAVGRLGYNDHGKTHAKIVANNAIKMLKILYKKGIEPSFVK DCKGSFEDSLVITLLGAYLHDIGNSVHRDIHHLHSAYLALDIVENILKKYYKEEKAYQMTTEVLHAIYSHSEGIMGLTIE AGVIAVADGTDMTKGRSRIPICKKCYDIHSVSAASIERVEIKEGDEKPIQIEVILSNEAGIFQIQEVLGEKIKWSGIKNY VSVYARVEKEKPVFEEITI >Mature_258_residues GRDMDFEELNSLQGIPKMIYDELIKNKKVNTFLKMSNIMAVGRLGYNDHGKTHAKIVANNAIKMLKILYKKGIEPSFVKD CKGSFEDSLVITLLGAYLHDIGNSVHRDIHHLHSAYLALDIVENILKKYYKEEKAYQMTTEVLHAIYSHSEGIMGLTIEA GVIAVADGTDMTKGRSRIPICKKCYDIHSVSAASIERVEIKEGDEKPIQIEVILSNEAGIFQIQEVLGEKIKWSGIKNYV SVYARVEKEKPVFEEITI
Specific function: Unknown
COG id: COG3294
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1020_METJA (Q58426)
Other databases:
- EMBL: L77117 - PIR: C64427 - RefSeq: NP_248014.1 - ProteinModelPortal: Q58426 - GeneID: 1451917 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1020 - NMPDR: fig|243232.1.peg.1051 - TIGR: MJ1020 - HOGENOM: HBG460684 - OMA: LHAILCH - ProtClustDB: CLSK2517679 - BioCyc: MJAN243232:MJ_1020-MONOMER - InterPro: IPR003607 - SMART: SM00471
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29218; Mature: 29087
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDMDFEELNSLQGIPKMIYDELIKNKKVNTFLKMSNIMAVGRLGYNDHGKTHAKIVAN CCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH NAIKMLKILYKKGIEPSFVKDCKGSFEDSLVITLLGAYLHDIGNSVHRDIHHLHSAYLAL HHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVENILKKYYKEEKAYQMTTEVLHAIYSHSEGIMGLTIEAGVIAVADGTDMTKGRSRIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCC ICKKCYDIHSVSAASIERVEIKEGDEKPIQIEVILSNEAGIFQIQEVLGEKIKWSGIKNY HHHHHHHHHCCCHHHHEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH VSVYARVEKEKPVFEEITI HHHHHHHHCCCCCHHHCCC >Mature Secondary Structure GRDMDFEELNSLQGIPKMIYDELIKNKKVNTFLKMSNIMAVGRLGYNDHGKTHAKIVAN CCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH NAIKMLKILYKKGIEPSFVKDCKGSFEDSLVITLLGAYLHDIGNSVHRDIHHLHSAYLAL HHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVENILKKYYKEEKAYQMTTEVLHAIYSHSEGIMGLTIEAGVIAVADGTDMTKGRSRIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCC ICKKCYDIHSVSAASIERVEIKEGDEKPIQIEVILSNEAGIFQIQEVLGEKIKWSGIKNY HHHHHHHHHCCCHHHHEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH VSVYARVEKEKPVFEEITI HHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087