| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669095
Identifier: 15669095
GI number: 15669095
Start: 834621
End: 834956
Strand: Direct
Name: 15669095
Synonym: MJ0905
Alternate gene names: NA
Gene position: 834621-834956 (Clockwise)
Preceding gene: 15669094
Following gene: 15669096
Centisome position: 50.13
GC content: 34.23
Gene sequence:
>336_bases ATGAGCTTGGCGTTTATTGACCCAATGATTATTAGGTCGCTAAATAAAAGTAAATTAAGAAAGAAGATATTGTATTTGCT GTATAAAATGTATCCTCATGGCATTTATCTATCTGAAATCTCGAGAAGGGTAAGGTCAGACCCAAGTAATGTGCTTGGAT GTCTAAAAGGTATGAATGGAAGGTATAACGGCCATTTCTCGCTTATAGAATTAGGATTAGTTGAATGTGTGGAGAGAGGG GGAGTAAAAATATATAAACTAACCGATTATGGAAAGAAAATAGTTGAGGTATTAAAAGACCAGGATAGTGACTTTATAGA ATCTTTAAGGTGGTAA
Upstream 100 bases:
>100_bases TTTCTACGATTTTTAGTCTGTTCGGATAAAGTATAATGCAAGTCTCTACAACACTAAAAAAGTTTTTATAAAATAATACT ACAGTGGGGGAGGGAGTAAT
Downstream 100 bases:
>100_bases TATGAAATTTGATTCAGCAAAAATTGAGAATGTGGTTGGGGGAGGGTCATTTGAGATAGGAGATGATGACTCAAAAATAT TGGATGAGATTATTAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSLAFIDPMIIRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNGRYNGHFSLIELGLVECVERG GVKIYKLTDYGKKIVEVLKDQDSDFIESLRW
Sequences:
>Translated_111_residues MSLAFIDPMIIRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNGRYNGHFSLIELGLVECVERG GVKIYKLTDYGKKIVEVLKDQDSDFIESLRW >Mature_110_residues SLAFIDPMIIRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNGRYNGHFSLIELGLVECVERGG VKIYKLTDYGKKIVEVLKDQDSDFIESLRW
Specific function: Unknown
COG id: COG3373
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y905_METJA (Q58315)
Other databases:
- EMBL: L77117 - PIR: A64413 - RefSeq: NP_247900.1 - ProteinModelPortal: Q58315 - SMR: Q58315 - GeneID: 1451794 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0905 - NMPDR: fig|243232.1.peg.937 - TIGR: MJ0905 - HOGENOM: HBG726387 - OMA: IYPSATY - ProtClustDB: CLSK865121 - BioCyc: MJAN243232:MJ_0905-MONOMER - InterPro: IPR010863 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF07381 DUF1495
EC number: NA
Molecular weight: Translated: 12873; Mature: 12742
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAFIDPMIIRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNG CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC RYNGHFSLIELGLVECVERGGVKIYKLTDYGKKIVEVLKDQDSDFIESLRW CCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure SLAFIDPMIIRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNG CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC RYNGHFSLIELGLVECVERGGVKIYKLTDYGKKIVEVLKDQDSDFIESLRW CCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087