| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669068
Identifier: 15669068
GI number: 15669068
Start: 803146
End: 804390
Strand: Direct
Name: 15669068
Synonym: MJ0878
Alternate gene names: NA
Gene position: 803146-804390 (Clockwise)
Preceding gene: 15669066
Following gene: 15669069
Centisome position: 48.24
GC content: 32.77
Gene sequence:
>1245_bases ATGAAAAAGCTTTTGGCTATTGGTATATTGTGTATAATGGTAACAGCTGTAATGTCTGGATGCGTAAGTGAGAAAGAGAT AAACATAAATAATTCCAATAAAATCACCACTAACATGCCAGTATCTGAAAAAAATATTACAAAAATTTTAAAATACGCTA AAAATATGAACCTAATATATTATGATGAAAATGGAAATATTGTGAATCCCTACAATGGGGATAAGTGGAAATATAAGGTT TTTATTGATGCAACGGGACAGAAGTTTTTATTGAAGAACAAAGATGACCCAGTTCCAAGTTGGGCAAAAGAGAAGTTGGG AGATAACTTCAAAGTTATAAATGTGCCTTTAACAAGGGTTATTGTTATGAGTTCTACAGAGATTGCGTTAATGGAGGCAA TAAATGATGATGGTTCAGTTATAGGGTCAGTTAAAGGAATAATGTGGGGAAAATCCTATAAGTGGTATTTTAAAGATATA AACAAAAGTTTAGCAGAAGGAAAAATAATTGATGTTGGTTCATCAAGTAATCCAAATTGGGATAAAATTATTGAAATCAA CCCACAGGTTATATTTGTATATCCTGGCTATGATGGAGATAAGATTATAGCAAAATGTAAAGAGTTAGGAATAACCTATG TTGCTGATGCGGAGTATTTAGAAAACGACCCGCTTGGTAGGTGTGAATGGGTTAAGATGTTTGCTGCCTTTTACAACAAA GAACCTGAAGCAAAAAGATATTTTGAAAAAGTTGAGGACAATTGTTTAAAAGTTATAAATAAAACTAAAAACTGTCCAAA AGTTACAGTTGCATGGGGTTACAACTCTCAATGGGGATGCTATGTTCCAGAAAATAATTCTTATGTTGCTAAGGAAATAA TGTTCTACTGCAATGGAGATTATATTTTCAAAGACCTCAATGGAACAGGCAGTGCAAAAATCAACTATGAGACGTTTGCT GAGAGGGCAAAAGATGCTGATGTTTGGGTTGTTCCTTCAAGTACAGCATGGTTATCAACATTTAAAGAAGATAATCCAGG ATATGAAACATTTAAAGCAGTTAAAAATGGAAGAGTATTTTGTGAGAGTGATGATTACTGGCAACTTGGATTGCTAAAAA CTGATGAGGTTATAATGGATTTAGCGACTATTTTGCATCCAGAAGCATTTAAAGGAAGAAAAACACACTTCTTCCTAAAA TATAACATAGAAAATAACACTGCGACACCATTCATTGCTAAATAA
Upstream 100 bases:
>100_bases TTTTAATATGGCTTGGATAATAAGATTTATATACATGCCAAAAATAAAGATTACTGAATAATTTATAAAACTTCTTTTAA TAAGGTAAGGAGGTTTTATT
Downstream 100 bases:
>100_bases AAATAACAAAATAAAAATAACACTTGTTTCTTTTTTATTTCTTTTATAATTAAAAAGTTATTAAATCATTAAATAATACA TTAATAATATTAGCAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKKLLAIGILCIMVTAVMSGCVSEKEININNSNKITTNMPVSEKNITKILKYAKNMNLIYYDENGNIVNPYNGDKWKYKV FIDATGQKFLLKNKDDPVPSWAKEKLGDNFKVINVPLTRVIVMSSTEIALMEAINDDGSVIGSVKGIMWGKSYKWYFKDI NKSLAEGKIIDVGSSSNPNWDKIIEINPQVIFVYPGYDGDKIIAKCKELGITYVADAEYLENDPLGRCEWVKMFAAFYNK EPEAKRYFEKVEDNCLKVINKTKNCPKVTVAWGYNSQWGCYVPENNSYVAKEIMFYCNGDYIFKDLNGTGSAKINYETFA ERAKDADVWVVPSSTAWLSTFKEDNPGYETFKAVKNGRVFCESDDYWQLGLLKTDEVIMDLATILHPEAFKGRKTHFFLK YNIENNTATPFIAK
Sequences:
>Translated_414_residues MKKLLAIGILCIMVTAVMSGCVSEKEININNSNKITTNMPVSEKNITKILKYAKNMNLIYYDENGNIVNPYNGDKWKYKV FIDATGQKFLLKNKDDPVPSWAKEKLGDNFKVINVPLTRVIVMSSTEIALMEAINDDGSVIGSVKGIMWGKSYKWYFKDI NKSLAEGKIIDVGSSSNPNWDKIIEINPQVIFVYPGYDGDKIIAKCKELGITYVADAEYLENDPLGRCEWVKMFAAFYNK EPEAKRYFEKVEDNCLKVINKTKNCPKVTVAWGYNSQWGCYVPENNSYVAKEIMFYCNGDYIFKDLNGTGSAKINYETFA ERAKDADVWVVPSSTAWLSTFKEDNPGYETFKAVKNGRVFCESDDYWQLGLLKTDEVIMDLATILHPEAFKGRKTHFFLK YNIENNTATPFIAK >Mature_414_residues MKKLLAIGILCIMVTAVMSGCVSEKEININNSNKITTNMPVSEKNITKILKYAKNMNLIYYDENGNIVNPYNGDKWKYKV FIDATGQKFLLKNKDDPVPSWAKEKLGDNFKVINVPLTRVIVMSSTEIALMEAINDDGSVIGSVKGIMWGKSYKWYFKDI NKSLAEGKIIDVGSSSNPNWDKIIEINPQVIFVYPGYDGDKIIAKCKELGITYVADAEYLENDPLGRCEWVKMFAAFYNK EPEAKRYFEKVEDNCLKVINKTKNCPKVTVAWGYNSQWGCYVPENNSYVAKEIMFYCNGDYIFKDLNGTGSAKINYETFA ERAKDADVWVVPSSTAWLSTFKEDNPGYETFKAVKNGRVFCESDDYWQLGLLKTDEVIMDLATILHPEAFKGRKTHFFLK YNIENNTATPFIAK
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y878_METJA (Q58288)
Other databases:
- EMBL: L77117 - PIR: F64409 - RefSeq: NP_247873.1 - ProteinModelPortal: Q58288 - GeneID: 1451767 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0878 - NMPDR: fig|243232.1.peg.910 - TIGR: MJ0878 - HOGENOM: HBG540976 - OMA: STTHLPH - ProtClustDB: CLSK796628 - BioCyc: MJAN243232:MJ_0878-MONOMER - InterPro: IPR002491
Pfam domain/function: PF01497 Peripla_BP_2
EC number: NA
Molecular weight: Translated: 47112; Mature: 47112
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS50983 FE_B12_PBP; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLAIGILCIMVTAVMSGCVSEKEININNSNKITTNMPVSEKNITKILKYAKNMNLIY CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEE YDENGNIVNPYNGDKWKYKVFIDATGQKFLLKNKDDPVPSWAKEKLGDNFKVINVPLTRV ECCCCCEECCCCCCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCEEEEEECEEEE IVMSSTEIALMEAINDDGSVIGSVKGIMWGKSYKWYFKDINKSLAEGKIIDVGSSSNPNW EEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCC DKIIEINPQVIFVYPGYDGDKIIAKCKELGITYVADAEYLENDPLGRCEWVKMFAAFYNK CEEEEECCEEEEEECCCCCHHHHHHHHHCCEEEEECCHHHCCCCCCHHHHHHHHHHHHCC EPEAKRYFEKVEDNCLKVINKTKNCPKVTVAWGYNSQWGCYVPENNSYVAKEIMFYCNGD CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCC YIFKDLNGTGSAKINYETFAERAKDADVWVVPSSTAWLSTFKEDNPGYETFKAVKNGRVF EEEEECCCCCCEEEEHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHCCEEE CESDDYWQLGLLKTDEVIMDLATILHPEAFKGRKTHFFLKYNIENNTATPFIAK ECCCCCEEEEEEEHHHHHHHHHHHHCCHHCCCCCEEEEEEEEECCCCCCCEEEC >Mature Secondary Structure MKKLLAIGILCIMVTAVMSGCVSEKEININNSNKITTNMPVSEKNITKILKYAKNMNLIY CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEE YDENGNIVNPYNGDKWKYKVFIDATGQKFLLKNKDDPVPSWAKEKLGDNFKVINVPLTRV ECCCCCEECCCCCCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCEEEEEECEEEE IVMSSTEIALMEAINDDGSVIGSVKGIMWGKSYKWYFKDINKSLAEGKIIDVGSSSNPNW EEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCC DKIIEINPQVIFVYPGYDGDKIIAKCKELGITYVADAEYLENDPLGRCEWVKMFAAFYNK CEEEEECCEEEEEECCCCCHHHHHHHHHCCEEEEECCHHHCCCCCCHHHHHHHHHHHHCC EPEAKRYFEKVEDNCLKVINKTKNCPKVTVAWGYNSQWGCYVPENNSYVAKEIMFYCNGD CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCC YIFKDLNGTGSAKINYETFAERAKDADVWVVPSSTAWLSTFKEDNPGYETFKAVKNGRVF EEEEECCCCCCEEEEHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHCCEEE CESDDYWQLGLLKTDEVIMDLATILHPEAFKGRKTHFFLKYNIENNTATPFIAK ECCCCCEEEEEEEHHHHHHHHHHHHCCHHCCCCCEEEEEEEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087