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The map label for this gene is ycfF [C]

Identifier: 15669057

GI number: 15669057

Start: 789607

End: 789996

Strand: Direct

Name: ycfF [C]

Synonym: MJ0866

Alternate gene names: 15669057

Gene position: 789607-789996 (Clockwise)

Preceding gene: 15669056

Following gene: 15669060

Centisome position: 47.42

GC content: 33.85

Gene sequence:

>390_bases
ATGTGTATCTTCTGCAAAATAATCAATGGAGAGATTCCAGCAAAGGTTGTTTATGAAGATGAGCATGTTTTAGCTTTTTT
AGATATAAATCCAAGAAATAAAGGGCATACTTTGGTTGTTCCTAAAAAGCACTATGAAAGATTTGATGAAATGCCTGATG
ATGAGCTCTGCAACTTTATAAAAGGAGTTAAAAAGACTGTTGAAGTTCTAAAAAAGCTTGGATTTGATGGCTACAATATA
GTCAATAACAACGGCAGAGTTGCGGGGCAAGAAGTTAATCATGTTCATTTCCATATCATTCCAAGGTATGAAGGAGACGG
AGAGGTTGTTAAATTTGGAGAGGTTAAAAACGTTGATTTAGATGAGGTTTTAAAGGAAATTAAAGGATAA

Upstream 100 bases:

>100_bases
GAGGCGAGGATACAAGGGAAAGATATAAGAGCTATAACGGATTTATTGTTTAAGTATAGAGATTTATTACTAAAAAAATA
AAAAATAATTTGGTGGGAGA

Downstream 100 bases:

>100_bases
GCTCCCCTTTCAATCCAAACGTCTTAGCATCAGTAATTTTCACTTTTCTAAACTCTCCTACCTCCCCTCCTTCAAATTTA
ACAACTTTAAAGTTGTCAGT

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MCIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKKTVEVLKKLGFDGYNI
VNNNGRVAGQEVNHVHFHIIPRYEGDGEVVKFGEVKNVDLDEVLKEIKG

Sequences:

>Translated_129_residues
MCIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKKTVEVLKKLGFDGYNI
VNNNGRVAGQEVNHVHFHIIPRYEGDGEVVKFGEVKNVDLDEVLKEIKG
>Mature_129_residues
MCIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKKTVEVLKKLGFDGYNI
VNNNGRVAGQEVNHVHFHIIPRYEGDGEVVKFGEVKNVDLDEVLKEIKG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain

Homologues:

Organism=Homo sapiens, GI4885413, Length=102, Percent_Identity=43.1372549019608, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI14211923, Length=101, Percent_Identity=36.6336633663366, Blast_Score=73, Evalue=8e-14,
Organism=Escherichia coli, GI1787346, Length=101, Percent_Identity=32.6732673267327, Blast_Score=61, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17506713, Length=100, Percent_Identity=38, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320078, Length=122, Percent_Identity=38.5245901639344, Blast_Score=105, Evalue=3e-24,
Organism=Drosophila melanogaster, GI28574010, Length=101, Percent_Identity=38.6138613861386, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581222, Length=102, Percent_Identity=38.2352941176471, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y866_METJA (Q58276)

Other databases:

- EMBL:   L77117
- PIR:   B64408
- RefSeq:   NP_247861.1
- ProteinModelPortal:   Q58276
- SMR:   Q58276
- GeneID:   1451755
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0866
- NMPDR:   fig|243232.1.peg.898
- TIGR:   MJ0866
- HOGENOM:   HBG743217
- OMA:   NEELAGQ
- ProtClustDB:   CLSK2749928
- BioCyc:   MJAN243232:MJ_0866-MONOMER
- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310
- Gene3D:   G3DSA:3.30.428.10
- PANTHER:   PTHR23089
- PRINTS:   PR00332

Pfam domain/function: PF01230 HIT; SSF54197 His_triad-like_motif

EC number: NA

Molecular weight: Translated: 14749; Mature: 14749

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00892 HIT_1; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFI
CEEEEEEECCCCCEEEEEECCEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCCHHHHHHH
KGVKKTVEVLKKLGFDGYNIVNNNGRVAGQEVNHVHFHIIPRYEGDGEVVKFGEVKNVDL
HHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEEEEEECCCCCEEEECCCCCCCH
DEVLKEIKG
HHHHHHHCC
>Mature Secondary Structure
MCIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFI
CEEEEEEECCCCCEEEEEECCEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCCHHHHHHH
KGVKKTVEVLKKLGFDGYNIVNNNGRVAGQEVNHVHFHIIPRYEGDGEVVKFGEVKNVDL
HHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEEEEEECCCCCEEEECCCCCCCH
DEVLKEIKG
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087