Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669049

Identifier: 15669049

GI number: 15669049

Start: 781976

End: 782317

Strand: Reverse

Name: 15669049

Synonym: MJ0858

Alternate gene names: NA

Gene position: 782317-781976 (Counterclockwise)

Preceding gene: 15669050

Following gene: 15669048

Centisome position: 46.99

GC content: 29.24

Gene sequence:

>342_bases
ATGAACGATAAAAATGTAGAGTTTGTTGCTACCCTAATATCCATATTAACTGTTAAAGAGGCATTAAATAGCGAAATGGA
AAATTTCGTTAAAGTTAGAGCTGCCATTGATAAAAGAGAGCTAAAGGATGATGATAAAGTTGCCATCTTTAATATAAACT
CAACAACAAGTTATCAAGTATTTTTTATAGATAAAGACACAAATATAGAGGAGTTGAAGGAAGAGTTTAAGAAGATGAAT
GTTAGAATTAATTATGATAGTGAGCAGGTCCTAAAAAGATATATTGAGAGGTTAAGGATTCAAAACAATTCTAAGCCCAT
ATCAAATAATAACAAACAATAG

Upstream 100 bases:

>100_bases
AGCAAAGAGAGAGAACTATGTATTTTATATACTTCCAGAGGAAGAAATTAAATTTGAAGAGGAATAAAATAAGAATAATT
AACATTAATTAAGGGATACT

Downstream 100 bases:

>100_bases
CAAAATTATAGCATAGAAAGAAAAATATAGAAATAGAATCCTACAAAATACTTATCATGCCCAAAACAATCAAACTAACT
AAAACTATTGCATTGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN
VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ

Sequences:

>Translated_113_residues
MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN
VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ
>Mature_113_residues
MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN
VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ

Specific function: Unknown

COG id: COG4009

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y858_METJA (Q58268)

Other databases:

- EMBL:   L77117
- PIR:   B64407
- RefSeq:   NP_247853.1
- ProteinModelPortal:   Q58268
- SMR:   Q58268
- GeneID:   1451747
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0858
- NMPDR:   fig|243232.1.peg.890
- TIGR:   MJ0858
- HOGENOM:   HBG541011
- OMA:   TTSYQAY
- ProtClustDB:   CLSK2749927
- BioCyc:   MJAN243232:MJ_0858-MONOMER
- InterPro:   IPR008032
- InterPro:   IPR016458
- Gene3D:   G3DSA:3.30.160.120
- PIRSF:   PIRSF005648

Pfam domain/function: PF05370 DUF749; SSF75412 DUF749

EC number: NA

Molecular weight: Translated: 13335; Mature: 13335

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
FFIDKDTNIEELKEEFKKMNVRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ
EEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
FFIDKDTNIEELKEEFKKMNVRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ
EEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087