| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669049
Identifier: 15669049
GI number: 15669049
Start: 781976
End: 782317
Strand: Reverse
Name: 15669049
Synonym: MJ0858
Alternate gene names: NA
Gene position: 782317-781976 (Counterclockwise)
Preceding gene: 15669050
Following gene: 15669048
Centisome position: 46.99
GC content: 29.24
Gene sequence:
>342_bases ATGAACGATAAAAATGTAGAGTTTGTTGCTACCCTAATATCCATATTAACTGTTAAAGAGGCATTAAATAGCGAAATGGA AAATTTCGTTAAAGTTAGAGCTGCCATTGATAAAAGAGAGCTAAAGGATGATGATAAAGTTGCCATCTTTAATATAAACT CAACAACAAGTTATCAAGTATTTTTTATAGATAAAGACACAAATATAGAGGAGTTGAAGGAAGAGTTTAAGAAGATGAAT GTTAGAATTAATTATGATAGTGAGCAGGTCCTAAAAAGATATATTGAGAGGTTAAGGATTCAAAACAATTCTAAGCCCAT ATCAAATAATAACAAACAATAG
Upstream 100 bases:
>100_bases AGCAAAGAGAGAGAACTATGTATTTTATATACTTCCAGAGGAAGAAATTAAATTTGAAGAGGAATAAAATAAGAATAATT AACATTAATTAAGGGATACT
Downstream 100 bases:
>100_bases CAAAATTATAGCATAGAAAGAAAAATATAGAAATAGAATCCTACAAAATACTTATCATGCCCAAAACAATCAAACTAACT AAAACTATTGCATTGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ
Sequences:
>Translated_113_residues MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ >Mature_113_residues MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQVFFIDKDTNIEELKEEFKKMN VRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ
Specific function: Unknown
COG id: COG4009
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y858_METJA (Q58268)
Other databases:
- EMBL: L77117 - PIR: B64407 - RefSeq: NP_247853.1 - ProteinModelPortal: Q58268 - SMR: Q58268 - GeneID: 1451747 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0858 - NMPDR: fig|243232.1.peg.890 - TIGR: MJ0858 - HOGENOM: HBG541011 - OMA: TTSYQAY - ProtClustDB: CLSK2749927 - BioCyc: MJAN243232:MJ_0858-MONOMER - InterPro: IPR008032 - InterPro: IPR016458 - Gene3D: G3DSA:3.30.160.120 - PIRSF: PIRSF005648
Pfam domain/function: PF05370 DUF749; SSF75412 DUF749
EC number: NA
Molecular weight: Translated: 13335; Mature: 13335
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE FFIDKDTNIEELKEEFKKMNVRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ EEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNDKNVEFVATLISILTVKEALNSEMENFVKVRAAIDKRELKDDDKVAIFNINSTTSYQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE FFIDKDTNIEELKEEFKKMNVRINYDSEQVLKRYIERLRIQNNSKPISNNNKQ EEEECCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087