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The map label for this gene is mcrC

Identifier: 15669034

GI number: 15669034

Start: 770296

End: 770898

Strand: Direct

Name: mcrC

Synonym: MJ0844

Alternate gene names: 15669034

Gene position: 770296-770898 (Clockwise)

Preceding gene: 15669033

Following gene: 15669035

Centisome position: 46.26

GC content: 40.96

Gene sequence:

>603_bases
ATGCCAGTAGGGAGAAGGGAACAAATTGTGGATTGTAGGTCAGTGATGGGTTTAGGAGAAGGGGGAGGATTAGCACAGAG
AGGGACATTTGCAGAGGCATTAAAAAATGATGTGGTAGTTGTAGCGATGTCACCAGGAAGGAGGCATATAACAAAACCTG
TCTGTGAGATAACTTATGGAATAAGGGAAGCAGGGATTCAAACAAGCGTTCTGGTTTTAAATGCTGGTTCAGGAATACCA
CATGATGCTCCGAGAGGAGCTCTGGGTTCAACCTTTGGTATCAAACCAGAAGAGGCAGAGCAAATAAATAGACATAAGCT
CTGTGTTGTTCATTTCGGAAACGTTATCAGCCATATCGTCTATAAAGCGGGTCTCCTCCTAAAATACGTTGAAATTCCAA
CGATTATTGTCTGTCAAGCTCCTGTGGATATGGAAGACCTTGCTAAATATGGAATAAAGACAAGGGATGTCATGCCCTTA
GAACCTAAGACCAAAGGGACAGTTGTAGATATCGTAACTGGAGTAATTAGGGGAGAATCTTGTCCCCAAACTAAAATTGA
TGAGGTAATAAGAAAAATAAAACTTCATTTAAACCTAAATTGA

Upstream 100 bases:

>100_bases
ATAAATGAGATGGACAGAAGATTGATAGGAATGGTTGATCCAAGAAGTAGAATGGCAAACTCTGTTACAGTTGTAGAAAA
AGAAGAAAAAGAGGAATAGT

Downstream 100 bases:

>100_bases
GGTGATTGTATGGCATACAAGCCACAGTTCTACCCAGGTCAAACAAAAATTGCTCAAAATAGAAGAGACCACATGAATCC
AGATGTTCAGTTAGAAAAGT

Product: methyl coenzyme M reductase I protein McrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPVGRREQIVDCRSVMGLGEGGGLAQRGTFAEALKNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLNAGSGIP
HDAPRGALGSTFGIKPEEAEQINRHKLCVVHFGNVISHIVYKAGLLLKYVEIPTIIVCQAPVDMEDLAKYGIKTRDVMPL
EPKTKGTVVDIVTGVIRGESCPQTKIDEVIRKIKLHLNLN

Sequences:

>Translated_200_residues
MPVGRREQIVDCRSVMGLGEGGGLAQRGTFAEALKNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLNAGSGIP
HDAPRGALGSTFGIKPEEAEQINRHKLCVVHFGNVISHIVYKAGLLLKYVEIPTIIVCQAPVDMEDLAKYGIKTRDVMPL
EPKTKGTVVDIVTGVIRGESCPQTKIDEVIRKIKLHLNLN
>Mature_199_residues
PVGRREQIVDCRSVMGLGEGGGLAQRGTFAEALKNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLNAGSGIPH
DAPRGALGSTFGIKPEEAEQINRHKLCVVHFGNVISHIVYKAGLLLKYVEIPTIIVCQAPVDMEDLAKYGIKTRDVMPLE
PKTKGTVVDIVTGVIRGESCPQTKIDEVIRKIKLHLNLN

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MCRC_METJA (Q58254)

Other databases:

- EMBL:   L77117
- PIR:   D64405
- RefSeq:   NP_247838.1
- ProteinModelPortal:   Q58254
- GeneID:   1451732
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0844
- NMPDR:   fig|243232.1.peg.875
- TIGR:   MJ0844
- HOGENOM:   HBG539645
- OMA:   HITKPVC
- ProtClustDB:   CLSK876361
- BioCyc:   MJAN243232:MJ_0844-MONOMER
- GO:   GO:0015948
- InterPro:   IPR007687
- PIRSF:   PIRSF003137
- TIGRFAMs:   TIGR03264

Pfam domain/function: PF04609 MCR_C

EC number: NA

Molecular weight: Translated: 21669; Mature: 21538

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGRREQIVDCRSVMGLGEGGGLAQRGTFAEALKNDVVVVAMSPGRRHITKPVCEITYG
CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
IREAGIQTSVLVLNAGSGIPHDAPRGALGSTFGIKPEEAEQINRHKLCVVHFGNVISHIV
HHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHCEEEEEHHHHHHHHH
YKAGLLLKYVEIPTIIVCQAPVDMEDLAKYGIKTRDVMPLEPKTKGTVVDIVTGVIRGES
HHHHHHHEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
CPQTKIDEVIRKIKLHLNLN
CCCHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
PVGRREQIVDCRSVMGLGEGGGLAQRGTFAEALKNDVVVVAMSPGRRHITKPVCEITYG
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
IREAGIQTSVLVLNAGSGIPHDAPRGALGSTFGIKPEEAEQINRHKLCVVHFGNVISHIV
HHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHCEEEEEHHHHHHHHH
YKAGLLLKYVEIPTIIVCQAPVDMEDLAKYGIKTRDVMPLEPKTKGTVVDIVTGVIRGES
HHHHHHHEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
CPQTKIDEVIRKIKLHLNLN
CCCHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087