| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668993
Identifier: 15668993
GI number: 15668993
Start: 730118
End: 730672
Strand: Direct
Name: 15668993
Synonym: MJ0807
Alternate gene names: NA
Gene position: 730118-730672 (Clockwise)
Preceding gene: 15668991
Following gene: 15668994
Centisome position: 43.85
GC content: 26.13
Gene sequence:
>555_bases TTGCAAAAAACTAAATTAAGGTTGATATTTATGATTATTTATAAAGAAATAGCTAAGCTAAATAAAACATTTCCTTTATT GAATGAGGAAAAGATACTCTTAGGAACTGACGGAAGTGTAACAAACATCTTAGAAATTTTATTTGAAGGGGAGTGTAGAG TAGAGACAATTAACCAAAAAATTGTTGCTAACACAAACTATAGAGAGGTTATTCTCAAAGTCAATAATATACCTTTAGTT TATGCAGTATCAAAAACACCATTTAAAAATATTGAGGAAGAGAACCTTAGAGAGGAGATAAAGAGAGATTTACTATCTGC AGATATTCCCATAGGTAAAATTATAAGAAAACACAACTTAGAAACAAGGAGAGAGATTAAATATATAGGAATTGCTGAAA TTGATGATTATTTAAAATCACTTTTAAAAACAAATTATAGTAGATTACCAAAAAGAACATATAATATAATATATAAAAAT AAAGTATTGATGGAAATTACTGAGATATTTGCCGTTAGAGGAAAGTTAGTAAAAAATACTTACAGTATAGATTAA
Upstream 100 bases:
>100_bases CACCAATAGTTTTTTGCAAAACATTTGAAGTACATAAGGAACTTATGAACGCCTTCCTTTGGGAAGGCGTTCAATTTTTC ATTATGAATTTTAATAACTT
Downstream 100 bases:
>100_bases GAGGCATTGCTTCCTTACGGAAGCAATGCATCCATTTTRATGAAATCGAAGCGTAAGCTTCAAGCTACAAAACCGTAGTT TTTCAACTTTCTTAAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MQKTKLRLIFMIIYKEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQKIVANTNYREVILKVNNIPLV YAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRKHNLETRREIKYIGIAEIDDYLKSLLKTNYSRLPKRTYNIIYKN KVLMEITEIFAVRGKLVKNTYSID
Sequences:
>Translated_184_residues MQKTKLRLIFMIIYKEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQKIVANTNYREVILKVNNIPLV YAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRKHNLETRREIKYIGIAEIDDYLKSLLKTNYSRLPKRTYNIIYKN KVLMEITEIFAVRGKLVKNTYSID >Mature_184_residues MQKTKLRLIFMIIYKEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQKIVANTNYREVILKVNNIPLV YAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRKHNLETRREIKYIGIAEIDDYLKSLLKTNYSRLPKRTYNIIYKN KVLMEITEIFAVRGKLVKNTYSID
Specific function: Unknown
COG id: COG3161
COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate--pyruvate lyase type 2 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y807_METJA (Q58217)
Other databases:
- EMBL: L77117 - PIR: G64400 - RefSeq: NP_247797.1 - ProteinModelPortal: Q58217 - SMR: Q58217 - GeneID: 1451689 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0807 - NMPDR: fig|243232.1.peg.834 - TIGR: MJ0807 - HOGENOM: HBG539125 - OMA: QRTYNII - ProtClustDB: CLSK876339 - BioCyc: MJAN243232:MJ_0807-MONOMER - InterPro: IPR002800
Pfam domain/function: PF01947 DUF98
EC number: NA
Molecular weight: Translated: 21549; Mature: 21549
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTKLRLIFMIIYKEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCE IVANTNYREVILKVNNIPLVYAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRKHNL EEECCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCC ETRREIKYIGIAEIDDYLKSLLKTNYSRLPKRTYNIIYKNKVLMEITEIFAVRGKLVKNT CHHHHEEEECHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC YSID CCCC >Mature Secondary Structure MQKTKLRLIFMIIYKEIAKLNKTFPLLNEEKILLGTDGSVTNILEILFEGECRVETINQK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCE IVANTNYREVILKVNNIPLVYAVSKTPFKNIEEENLREEIKRDLLSADIPIGKIIRKHNL EEECCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCC ETRREIKYIGIAEIDDYLKSLLKTNYSRLPKRTYNIIYKNKVLMEITEIFAVRGKLVKNT CHHHHEEEECHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC YSID CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087