| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668988
Identifier: 15668988
GI number: 15668988
Start: 726397
End: 726963
Strand: Direct
Name: 15668988
Synonym: MJ0802
Alternate gene names: NA
Gene position: 726397-726963 (Clockwise)
Preceding gene: 15668987
Following gene: 15668989
Centisome position: 43.63
GC content: 33.16
Gene sequence:
>567_bases ATGGCTGAAATAGTTGTCCATTGTGAAGATAAAGCCGGGAAGGAGATTTATACAAAGGTCATACAAACAGCGTTGGAAGA TTTGCTTTTAGGAAAATCAATAATTAGGGTTGAATTTATTGCTAAAGAGAAAGAACCTTATTTTATATTAGGGGTTTTAC CAAAACATACAAGAAGAGCTATTAAGTTGAGAGATTTTGCTGAAATTGTAGAGCAAAAAAAAGAAGGTGGTAAAATAATA TACAAGCTAAAAATCACTGATGAGACATATCTCCCACATCTGTTAAAAAAGATACACGTCATAGACCAGCCATCAAGGTT TGAGGTTGTTACAGATTCAGATATTGATTTAGATATGGAAGTTTATGATGCAGGTAAGGATTTCATAGATAAGGTTATGG ATTTTATGGGTAGGGTGTTTCCAGAGGGTATGAGGATTAAAAATACCTATATAGACAAAGCCATTGTTTGTATTGCTTCA GAAAGACCATTGAAGGATGAGGAGATAGAAGAGGCATTAAAATTAAAGGATAAGTTAGAGAAGATGAATACTGCTGGTTA TTATTAA
Upstream 100 bases:
>100_bases TTAGCTTTGATAATTGGTTAATGGACGGGAGGTATACCAATAGGAGGTTTCCTCCTATGGTTGCGAATGCTATAAAGAGA GTGTTATAATTGGTGATAAC
Downstream 100 bases:
>100_bases GCACTGATAAGGGGAGTTTATGAACTCCTATGGAGTAATTCTTATATCGTACGTTGGGTTAATCAAGCTTGCATTAGCTG GGATTTTGTGTTATGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAEIVVHCEDKAGKEIYTKVIQTALEDLLLGKSIIRVEFIAKEKEPYFILGVLPKHTRRAIKLRDFAEIVEQKKEGGKII YKLKITDETYLPHLLKKIHVIDQPSRFEVVTDSDIDLDMEVYDAGKDFIDKVMDFMGRVFPEGMRIKNTYIDKAIVCIAS ERPLKDEEIEEALKLKDKLEKMNTAGYY
Sequences:
>Translated_188_residues MAEIVVHCEDKAGKEIYTKVIQTALEDLLLGKSIIRVEFIAKEKEPYFILGVLPKHTRRAIKLRDFAEIVEQKKEGGKII YKLKITDETYLPHLLKKIHVIDQPSRFEVVTDSDIDLDMEVYDAGKDFIDKVMDFMGRVFPEGMRIKNTYIDKAIVCIAS ERPLKDEEIEEALKLKDKLEKMNTAGYY >Mature_187_residues AEIVVHCEDKAGKEIYTKVIQTALEDLLLGKSIIRVEFIAKEKEPYFILGVLPKHTRRAIKLRDFAEIVEQKKEGGKIIY KLKITDETYLPHLLKKIHVIDQPSRFEVVTDSDIDLDMEVYDAGKDFIDKVMDFMGRVFPEGMRIKNTYIDKAIVCIASE RPLKDEEIEEALKLKDKLEKMNTAGYY
Specific function: Unknown
COG id: COG4051
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y802_METJA (Q58212)
Other databases:
- EMBL: L77117 - PIR: B64400 - RefSeq: NP_247792.1 - ProteinModelPortal: Q58212 - GeneID: 1451684 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0802 - NMPDR: fig|243232.1.peg.829 - TIGR: MJ0802 - HOGENOM: HBG541179 - OMA: NRVFPEG - ProtClustDB: CLSK876336 - BioCyc: MJAN243232:MJ_0802-MONOMER - InterPro: IPR016762 - PIRSF: PIRSF019464 - TIGRFAMs: TIGR03291
Pfam domain/function: PF09886 DUF2113
EC number: NA
Molecular weight: Translated: 21769; Mature: 21638
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVVHCEDKAGKEIYTKVIQTALEDLLLGKSIIRVEFIAKEKEPYFILGVLPKHTRRA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEEECCCHHHHHH IKLRDFAEIVEQKKEGGKIIYKLKITDETYLPHLLKKIHVIDQPSRFEVVTDSDIDLDME HHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH VYDAGKDFIDKVMDFMGRVFPEGMRIKNTYIDKAIVCIASERPLKDEEIEEALKLKDKLE HHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH KMNTAGYY HHHCCCCC >Mature Secondary Structure AEIVVHCEDKAGKEIYTKVIQTALEDLLLGKSIIRVEFIAKEKEPYFILGVLPKHTRRA CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEEECCCHHHHHH IKLRDFAEIVEQKKEGGKIIYKLKITDETYLPHLLKKIHVIDQPSRFEVVTDSDIDLDME HHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH VYDAGKDFIDKVMDFMGRVFPEGMRIKNTYIDKAIVCIASERPLKDEEIEEALKLKDKLE HHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH KMNTAGYY HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087