| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668977
Identifier: 15668977
GI number: 15668977
Start: 716397
End: 716933
Strand: Direct
Name: 15668977
Synonym: MJ0793
Alternate gene names: NA
Gene position: 716397-716933 (Clockwise)
Preceding gene: 15668976
Following gene: 15668978
Centisome position: 43.03
GC content: 27.93
Gene sequence:
>537_bases ATGAAAATACCAATAATCTTAACTCTAATGCTCTTCTCATTGGGTTTTATTTTTGGATTTATCTCAATAAACAACTTATC AAAAATTAACGATAAGGATTTATCCAACTATATACCCAATATACAGTTTAACTTTCCTTCAATATTAACAAACAACTTAA AAGTTATCTTCCTAATGTTGGCTGGTTCTATAACTTTTGGATTATCTACTTTTATAAATCTAATATTCAACGGTTTTAAT GTTGGTGTCTTAATTGGTTCTATTTCCCTAACTAACGAACCGTTAAAATTAATAACCGCTTTAATTCTTCCACACGGAAT ATTCGAAATCTCAGCAATGTTAATATCAGCAGTAGCAGGTTTTAAAATTCCTTACAAAGTAACTCTCTACTTATTAGATA AAAAAGAAAAACCACTTACAGAAGAAGATATTAAGGACTTTTTAAAATTATCTCTAATTTCAATAATTCTAATCGTTATA GCCGCTTTTATTGAAGTTTATATCACTCCAAAGATAGCCACTTATCTACTAACGTAA
Upstream 100 bases:
>100_bases TAGGACAATATTATTACATAAAATAAGAGGTACTACTTAGAACACTATACTATACAATAATGATGATAAAATAAATAATA ACTTTAACAATTGTGAAACC
Downstream 100 bases:
>100_bases GATTTAAATAGTTGAAGTAACAAATACAATCATTGAAAAATCTAATAGGTGATACTAATGAATTTAATAGAAGCTTTAAC AAATCCAGACACTTTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI AAFIEVYITPKIATYLLT
Sequences:
>Translated_178_residues MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI AAFIEVYITPKIATYLLT >Mature_178_residues MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI AAFIEVYITPKIATYLLT
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0706 and Synechocystis PCC 6803 slr1478
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y793_METJA (Q58203)
Other databases:
- EMBL: L77117 - PIR: A64399 - RefSeq: NP_247781.1 - ProteinModelPortal: Q58203 - GeneID: 1451673 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0793 - NMPDR: fig|243232.1.peg.818 - TIGR: MJ0793 - HOGENOM: HBG541159 - OMA: TIFLHAI - ProtClustDB: CLSK796580 - BioCyc: MJAN243232:MJ_0793-MONOMER - InterPro: IPR002798
Pfam domain/function: PF01944 DUF95
EC number: NA
Molecular weight: Translated: 19804; Mature: 19804
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc4236ec)-; HASH(0xcabaa90)-; HASH(0x406bad38)-; HASH(0xd057368)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLML CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCHHHHHCCHHHHHHHH AGSITFGLSTFINLIFNGFNVGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAG HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC FKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVIAAFIEVYITPKIATYLLT CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH >Mature Secondary Structure MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLML CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCHHHHHCCHHHHHHHH AGSITFGLSTFINLIFNGFNVGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAG HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC FKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVIAAFIEVYITPKIATYLLT CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087