Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668977

Identifier: 15668977

GI number: 15668977

Start: 716397

End: 716933

Strand: Direct

Name: 15668977

Synonym: MJ0793

Alternate gene names: NA

Gene position: 716397-716933 (Clockwise)

Preceding gene: 15668976

Following gene: 15668978

Centisome position: 43.03

GC content: 27.93

Gene sequence:

>537_bases
ATGAAAATACCAATAATCTTAACTCTAATGCTCTTCTCATTGGGTTTTATTTTTGGATTTATCTCAATAAACAACTTATC
AAAAATTAACGATAAGGATTTATCCAACTATATACCCAATATACAGTTTAACTTTCCTTCAATATTAACAAACAACTTAA
AAGTTATCTTCCTAATGTTGGCTGGTTCTATAACTTTTGGATTATCTACTTTTATAAATCTAATATTCAACGGTTTTAAT
GTTGGTGTCTTAATTGGTTCTATTTCCCTAACTAACGAACCGTTAAAATTAATAACCGCTTTAATTCTTCCACACGGAAT
ATTCGAAATCTCAGCAATGTTAATATCAGCAGTAGCAGGTTTTAAAATTCCTTACAAAGTAACTCTCTACTTATTAGATA
AAAAAGAAAAACCACTTACAGAAGAAGATATTAAGGACTTTTTAAAATTATCTCTAATTTCAATAATTCTAATCGTTATA
GCCGCTTTTATTGAAGTTTATATCACTCCAAAGATAGCCACTTATCTACTAACGTAA

Upstream 100 bases:

>100_bases
TAGGACAATATTATTACATAAAATAAGAGGTACTACTTAGAACACTATACTATACAATAATGATGATAAAATAAATAATA
ACTTTAACAATTGTGAAACC

Downstream 100 bases:

>100_bases
GATTTAAATAGTTGAAGTAACAAATACAATCATTGAAAAATCTAATAGGTGATACTAATGAATTTAATAGAAGCTTTAAC
AAATCCAGACACTTTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN
VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI
AAFIEVYITPKIATYLLT

Sequences:

>Translated_178_residues
MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN
VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI
AAFIEVYITPKIATYLLT
>Mature_178_residues
MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLMLAGSITFGLSTFINLIFNGFN
VGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAGFKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVI
AAFIEVYITPKIATYLLT

Specific function: Unknown

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0706 and Synechocystis PCC 6803 slr1478

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y793_METJA (Q58203)

Other databases:

- EMBL:   L77117
- PIR:   A64399
- RefSeq:   NP_247781.1
- ProteinModelPortal:   Q58203
- GeneID:   1451673
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0793
- NMPDR:   fig|243232.1.peg.818
- TIGR:   MJ0793
- HOGENOM:   HBG541159
- OMA:   TIFLHAI
- ProtClustDB:   CLSK796580
- BioCyc:   MJAN243232:MJ_0793-MONOMER
- InterPro:   IPR002798

Pfam domain/function: PF01944 DUF95

EC number: NA

Molecular weight: Translated: 19804; Mature: 19804

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc4236ec)-; HASH(0xcabaa90)-; HASH(0x406bad38)-; HASH(0xd057368)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLML
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCHHHHHCCHHHHHHHH
AGSITFGLSTFINLIFNGFNVGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAG
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
FKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVIAAFIEVYITPKIATYLLT
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH
>Mature Secondary Structure
MKIPIILTLMLFSLGFIFGFISINNLSKINDKDLSNYIPNIQFNFPSILTNNLKVIFLML
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCHHHHHCCHHHHHHHH
AGSITFGLSTFINLIFNGFNVGVLIGSISLTNEPLKLITALILPHGIFEISAMLISAVAG
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
FKIPYKVTLYLLDKKEKPLTEEDIKDFLKLSLISIILIVIAAFIEVYITPKIATYLLT
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087