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The map label for this gene is yjjV [C]

Identifier: 15668942

GI number: 15668942

Start: 684068

End: 684823

Strand: Reverse

Name: yjjV [C]

Synonym: MJ0761

Alternate gene names: 15668942

Gene position: 684823-684068 (Counterclockwise)

Preceding gene: 15668943

Following gene: 15668941

Centisome position: 41.13

GC content: 33.6

Gene sequence:

>756_bases
ATGATAGATGCCCACACTCACTTAGATGTTAGGAGCTTTGAAGATTTGGAAAAAATGGCATTGAGTGGAATTGAGACAAT
TATAACCTGTGCTCACGACCCATATAAAATGAGTACTCCAGAGGTTTATTTAGACCACTGGGATAGGTTGATTAATTTAG
AGGTTAAGAGGGGAGAGATGGCTGGTGTTGAAGTTAAAGTAGCAGTTGGAGTTCATCCTATGGGGTATCCAAAGAATTGG
GAGGTTTTAATAAAAAAACTTCCAGAGTTTTTAGATAATGAGAACGTTGTTGCTATTGGAGAAACTGGTTTGCATTATCT
AACAGAGGATGAGAAGAACCTTTTGAGAGAGCAGTTATATTTAGCTAAAGATTATAATATGCCAATAATTATCCATACAC
CAGAAAAGAACAAAAAAGAGGCATTAATTGAAATTTTAAAGATTTTAGATGAAGTTAAAATAAAAGATAGCTTAGTTATG
ATTGACCATATAAATAAGGAGACAGTTGATTTAATCGATAGGGATGTTTATGTTGGTTTAACTGTCCAACCGTCAATGAA
GCTAACCCACGAAGAAGCCGCAGAGATAATTAAAAATTACAACAAAAAATTCATTTTAAGTAGTGATTTGGGTAGTTTGA
AGGCGGATATTTATGCACTACCAAGAACTAAGTTGTATATGAAAAATATTGGTGTTGATGAGGAAAAGATAATTGCCTCA
GTTTATAAGAATGCGAAGGGGTTTTATAGATTATAA

Upstream 100 bases:

>100_bases
TTGGTTGTTGTTCTTCTTTTGGATAGTAACTTTAATAAAAACGATAAACAAAGTTTATAGTGGAGAGTTATTCAAAGACA
AAATAAATTAAGGTGATAGG

Downstream 100 bases:

>100_bases
ATAATTATATATTTAAATTTTGAAAGTATGATAACTTTTGTTTTTATTGTTTTTAGTAAAACCTCAATAATTTTAAAAAC
TTTTAATCGAAAGGTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MIDAHTHLDVRSFEDLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEMAGVEVKVAVGVHPMGYPKNW
EVLIKKLPEFLDNENVVAIGETGLHYLTEDEKNLLREQLYLAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVM
IDHINKETVDLIDRDVYVGLTVQPSMKLTHEEAAEIIKNYNKKFILSSDLGSLKADIYALPRTKLYMKNIGVDEEKIIAS
VYKNAKGFYRL

Sequences:

>Translated_251_residues
MIDAHTHLDVRSFEDLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEMAGVEVKVAVGVHPMGYPKNW
EVLIKKLPEFLDNENVVAIGETGLHYLTEDEKNLLREQLYLAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVM
IDHINKETVDLIDRDVYVGLTVQPSMKLTHEEAAEIIKNYNKKFILSSDLGSLKADIYALPRTKLYMKNIGVDEEKIIAS
VYKNAKGFYRL
>Mature_251_residues
MIDAHTHLDVRSFEDLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEMAGVEVKVAVGVHPMGYPKNW
EVLIKKLPEFLDNENVVAIGETGLHYLTEDEKNLLREQLYLAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVM
IDHINKETVDLIDRDVYVGLTVQPSMKLTHEEAAEIIKNYNKKFILSSDLGSLKADIYALPRTKLYMKNIGVDEEKIIAS
VYKNAKGFYRL

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y761_METJA (Q58171)

Other databases:

- EMBL:   L77117
- PIR:   A64395
- RefSeq:   NP_247746.1
- ProteinModelPortal:   Q58171
- SMR:   Q58171
- GeneID:   1451638
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0761
- NMPDR:   fig|243232.1.peg.783
- TIGR:   MJ0761
- HOGENOM:   HBG309638
- OMA:   TCAHDPY
- ProtClustDB:   CLSK796560
- BioCyc:   MJAN243232:MJ_0761-MONOMER
- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012022
- PANTHER:   PTHR10060
- PIRSF:   PIRSF005295

Pfam domain/function: PF01026 TatD_DNase

EC number: 3.1.21.- [C]

Molecular weight: Translated: 28838; Mature: 28838

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS01137 TATD_1; PS01090 TATD_2; PS01091 TATD_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAHTHLDVRSFEDLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEM
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHEEEEEEECCCC
AGVEVKVAVGVHPMGYPKNWEVLIKKLPEFLDNENVVAIGETGLHYLTEDEKNLLREQLY
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHH
LAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVMIDHINKETVDLIDRDVYVGL
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEEEE
TVQPSMKLTHEEAAEIIKNYNKKFILSSDLGSLKADIYALPRTKLYMKNIGVDEEKIIAS
EECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHEEECCCHHHHHHHCCCCHHHHHHH
VYKNAKGFYRL
HHHCCCCCCCC
>Mature Secondary Structure
MIDAHTHLDVRSFEDLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEM
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHEEEEEEECCCC
AGVEVKVAVGVHPMGYPKNWEVLIKKLPEFLDNENVVAIGETGLHYLTEDEKNLLREQLY
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHH
LAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVMIDHINKETVDLIDRDVYVGL
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEEEE
TVQPSMKLTHEEAAEIIKNYNKKFILSSDLGSLKADIYALPRTKLYMKNIGVDEEKIIAS
EECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHEEECCCHHHHHHHCCCCHHHHHHH
VYKNAKGFYRL
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087