| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668922
Identifier: 15668922
GI number: 15668922
Start: 669037
End: 669387
Strand: Reverse
Name: 15668922
Synonym: MJ0741
Alternate gene names: NA
Gene position: 669387-669037 (Counterclockwise)
Preceding gene: 15668923
Following gene: 15668921
Centisome position: 40.2
GC content: 33.33
Gene sequence:
>351_bases ATGACACACTACTGCGGAATAAACCGAATGAAAGAAGGAACTGATTTTGAAAAGAAACATACTCCATTTATTGAGTGTAA AGACAGAGTTAAAGCAAACGATTATTTTGAAGTAAAAATTTCAACTGGAATTCCACATCCTATGGAAGATAATCACTTTA TACATTGGATCGAGTTATATATGGGAGATCTTTATTTAGCAAGAGTTGATTTTACCCAATTTATGAAACCAGAGGTTAAG TTAATGGTAAAAGCCCCGTCAAAAGAACATGAGAAATTTATATTAAGGGCATTAATGAGATGCAATCTTCACGGGGTCTG GGAATACGAAAAAGAGATTCTGCTTGAATAA
Upstream 100 bases:
>100_bases ATAGATAATCTTTTATTTATTAATTTAATTTATTTCATACCCTTATACTCTACTTAACTTAGTTTGATTACTATGTATAA CGAAAAATCGTGGGGACAAT
Downstream 100 bases:
>100_bases AATCCCATTTTTATAAAGTAAAAAATAATAAACTAAAAACTAATAACTTGCATATAAAAAATCACAAATACGATAATCGT CTTTAATTTCATTATATTAT
Product: desulfoferrodoxin
Products: NA
Alternate protein names: SOR
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTHYCGINRMKEGTDFEKKHTPFIECKDRVKANDYFEVKISTGIPHPMEDNHFIHWIELYMGDLYLARVDFTQFMKPEVK LMVKAPSKEHEKFILRALMRCNLHGVWEYEKEILLE
Sequences:
>Translated_116_residues MTHYCGINRMKEGTDFEKKHTPFIECKDRVKANDYFEVKISTGIPHPMEDNHFIHWIELYMGDLYLARVDFTQFMKPEVK LMVKAPSKEHEKFILRALMRCNLHGVWEYEKEILLE >Mature_115_residues THYCGINRMKEGTDFEKKHTPFIECKDRVKANDYFEVKISTGIPHPMEDNHFIHWIELYMGDLYLARVDFTQFMKPEVKL MVKAPSKEHEKFILRALMRCNLHGVWEYEKEILLE
Specific function: Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide
COG id: COG2033
COG function: function code C; Desulfoferrodoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the desulfoferrodoxin family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SOR_METJA (Q58151)
Other databases:
- EMBL: L77117 - PIR: E64392 - RefSeq: NP_247726.1 - ProteinModelPortal: Q58151 - SMR: Q58151 - GeneID: 1451618 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0741 - NMPDR: fig|243232.1.peg.763 - TIGR: MJ0741 - HOGENOM: HBG541098 - OMA: INRAKDP - ProtClustDB: CLSK876311 - BioCyc: MJAN243232:MJ_0741-MONOMER - BRENDA: 1.15.1.2 - GO: GO:0006810 - InterPro: IPR002742 - TIGRFAMs: TIGR00332
Pfam domain/function: PF01880 Desulfoferrodox; SSF49367 Desulfoferrodox
EC number: =1.15.1.2
Molecular weight: Translated: 13950; Mature: 13819
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHYCGINRMKEGTDFEKKHTPFIECKDRVKANDYFEVKISTGIPHPMEDNHFIHWIELY CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHH MGDLYLARVDFTQFMKPEVKLMVKAPSKEHEKFILRALMRCNLHGVWEYEKEILLE HCCEEEEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEECCHHHCCC >Mature Secondary Structure THYCGINRMKEGTDFEKKHTPFIECKDRVKANDYFEVKISTGIPHPMEDNHFIHWIELY CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHH MGDLYLARVDFTQFMKPEVKLMVKAPSKEHEKFILRALMRCNLHGVWEYEKEILLE HCCEEEEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087