| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668915
Identifier: 15668915
GI number: 15668915
Start: 665918
End: 666532
Strand: Reverse
Name: 15668915
Synonym: MJ0734
Alternate gene names: NA
Gene position: 666532-665918 (Counterclockwise)
Preceding gene: 15668916
Following gene: 15668914
Centisome position: 40.03
GC content: 33.17
Gene sequence:
>615_bases TTGATTAACAACTTTTTTGTGATAAATATGAAAGAGACACTAAAAAACTTAACAAAAGCATATATAGGAGAGAGTTTAGC AAGGAATAGATATACCTGTTATGCAAAGATTGCAAAACAAGAGGGATATGAGCAGATAGCTGAGATATTTTTATTAACTG CTGAAAATGAGAGAGAGCATGCCAAGTGGCTTTATTACTTAATAACCGAACTAAAAAAGAAATATAACATTGATGATAAA GCTATAAAAGTTGATGGTGTAGAAGTTCCAATTGTTTTAGGAAATACTGCTGAAAACTTAAAAGCATCGATTGAAGGAGA GCATTTTGAGCACACAGAGATGTATCCAAAGTTTGCTGACATTGCTGAAAAAGAAGGACTTAAAGAGATTGCAGATAGGT TGAGAGCTATAGGGATAGCTGAAAAGCATCATGAAGAGAGGTTTAAAAAACTGCTAAAGGAAGTTGAAGAAGGAACGGTA TTTAAAAAAGATAAACCAGTTGAATGGGTTTGTAGAAAATGCGGTTTTGTTCATCTTGGAAAAGAACCACCAGAGAAGTG TCCTTCTTGCAGTCATCCAAGGAAATACTTTGAAGTTAAATGTGAAAAATATTAA
Upstream 100 bases:
>100_bases AGGTAAAGTAGGAAAAGAATCATTCGAGCCGTTAGATGAGTGGGTAGAGTTTGATGAATAATTAAAAATTTTATTCAACA TATTTAACATTTCATTATTA
Downstream 100 bases:
>100_bases ATTTAATTAATTTAATCAATTAAAACAAATTATAAATGAGGTGGGGGTTTATGAAAGTTGCCTTCTTAATATTTTCTTAC TTTCACAAAAATCAGCCAAA
Product: rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MINNFFVINMKETLKNLTKAYIGESLARNRYTCYAKIAKQEGYEQIAEIFLLTAENEREHAKWLYYLITELKKKYNIDDK AIKVDGVEVPIVLGNTAENLKASIEGEHFEHTEMYPKFADIAEKEGLKEIADRLRAIGIAEKHHEERFKKLLKEVEEGTV FKKDKPVEWVCRKCGFVHLGKEPPEKCPSCSHPRKYFEVKCEKY
Sequences:
>Translated_204_residues MINNFFVINMKETLKNLTKAYIGESLARNRYTCYAKIAKQEGYEQIAEIFLLTAENEREHAKWLYYLITELKKKYNIDDK AIKVDGVEVPIVLGNTAENLKASIEGEHFEHTEMYPKFADIAEKEGLKEIADRLRAIGIAEKHHEERFKKLLKEVEEGTV FKKDKPVEWVCRKCGFVHLGKEPPEKCPSCSHPRKYFEVKCEKY >Mature_204_residues MINNFFVINMKETLKNLTKAYIGESLARNRYTCYAKIAKQEGYEQIAEIFLLTAENEREHAKWLYYLITELKKKYNIDDK AIKVDGVEVPIVLGNTAENLKASIEGEHFEHTEMYPKFADIAEKEGLKEIADRLRAIGIAEKHHEERFKKLLKEVEEGTV FKKDKPVEWVCRKCGFVHLGKEPPEKCPSCSHPRKYFEVKCEKY
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RUBY_METJA (Q58144)
Other databases:
- EMBL: L77117 - PIR: F64391 - RefSeq: NP_247719.1 - ProteinModelPortal: Q58144 - SMR: Q58144 - GeneID: 1451611 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0734 - NMPDR: fig|243232.1.peg.756 - TIGR: MJ0734 - HOGENOM: HBG700480 - OMA: AEKQHEK - ProtClustDB: CLSK2517650 - BioCyc: MJAN243232:MJ_0734-MONOMER - GO: GO:0005737 - GO: GO:0006810 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 - Gene3D: G3DSA:1.20.1260.10 - Gene3D: G3DSA:2.20.28.10
Pfam domain/function: PF02915 Rubrerythrin; SSF47240 Ferritin/RR_like
EC number: NA
Molecular weight: Translated: 23835; Mature: 23835
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS50905 FERRITIN_LIKE; PS50903 RUBREDOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNFFVINMKETLKNLTKAYIGESLARNRYTCYAKIAKQEGYEQIAEIFLLTAENEREH CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH AKWLYYLITELKKKYNIDDKAIKVDGVEVPIVLGNTAENLKASIEGEHFEHTEMYPKFAD HHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHCCCCCCHHHHHCCHHHH IAEKEGLKEIADRLRAIGIAEKHHEERFKKLLKEVEEGTVFKKDKPVEWVCRKCGFVHLG HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECC KEPPEKCPSCSHPRKYFEVKCEKY CCCHHHCCCCCCCHHHHHEEECCC >Mature Secondary Structure MINNFFVINMKETLKNLTKAYIGESLARNRYTCYAKIAKQEGYEQIAEIFLLTAENEREH CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH AKWLYYLITELKKKYNIDDKAIKVDGVEVPIVLGNTAENLKASIEGEHFEHTEMYPKFAD HHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHCCCCCCHHHHHCCHHHH IAEKEGLKEIADRLRAIGIAEKHHEERFKKLLKEVEEGTVFKKDKPVEWVCRKCGFVHLG HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECC KEPPEKCPSCSHPRKYFEVKCEKY CCCHHHCCCCCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087