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The map label for this gene is yggB [C]

Identifier: 15668881

GI number: 15668881

Start: 625850

End: 626824

Strand: Direct

Name: yggB [C]

Synonym: MJ0700

Alternate gene names: 15668881

Gene position: 625850-626824 (Clockwise)

Preceding gene: 15668879

Following gene: 15668882

Centisome position: 37.59

GC content: 28.62

Gene sequence:

>975_bases
ATGATTGATAATAAACTAAAATTAGTAATAAAAGTTGTATTGTTAATATTTCTCTTACACTCTCTTATGTCAATTTTTAA
TTTAGAGACGTATATTAAGATACTTGCCAAATATCAAAATCAAATAATGATTATAGCTATCATCATCTTATCTGGACTTA
TTATCGTAGATATTGCATCGGAGGTATTTAAAAAGTATGCAAGAACGAGAGAGGAGAAAGCTGGGGAATATTTAACCTTA
AACTATATCTTCAAATATCTTGTTTATGTTTGTGTTACTTTAATGATTTTTGGCGTTATCTACCAAAATGTCTCATCATT
AGTAGTTTCAGTTGGTTTAATTGGTGCTGCTGTAACATACGCTTTACAAAAGCCAATTTTAAACTTTGCTGGATGGATTA
TCATCCTATATACAAGAACAATAAAGATAGGAGATAGAATTTTTATTAAAAATATGGGAGCTGGGGATGTATTTGATATA
GATACTCAACACATTTACTTAAGTGAATTAACAACAGACACCTTTGAACCAACAGGAAGGGTCTTAATTATTCCAAATTC
TTATATATTCACCGCCTCAATAGAAAACCTTACAAAAGGGTCTCCATATATTTGGGATAACATAGTTGTGCATTTTACAC
TAAATAGCAATATAAACAAGGCAGAAAAAATTGTTTTTGAATCAGCAGATGAAGTTATTGGAAATTTAATGAGAGAACTT
TATGAAAAATGGTCTAAGAGAAAATATCTCATTTCAAGGAAGTTATCTGATAAACCAGTTGTAAGAGTTGGAATTACAAG
GAGTTCTTTTTATATAAAAGCACTTTATCTTGTGAATGTTTATGAGAAAGCAAAAATTAGAAGTGAAATTAACAAGAGAA
TTTTAGAAAAAGTAAATAAAGAAAATGATGTAAAATTGGCTTATCCACACATTAAAGCGGTTATTGAAACAGAAAACAAA
TTTAAAAACACGTGA

Upstream 100 bases:

>100_bases
GCCTTCTTCAATAATTAAAGTTCCTTTTCTTAGCTTAAAGTCCTCCCCATATAGAAATTGGCTTTTTAATAGCAAAAAGA
CCACCATTGGGGTTTAATTT

Downstream 100 bases:

>100_bases
TTATTATGCTTTCAGAATACTTGGAGGAGTTTAAAGAGTATTTAGAAAGATTTAAAAATATAGACATCAATTTCTCAGAT
GTATTAAAAATGTCAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIDNKLKLVIKVVLLIFLLHSLMSIFNLETYIKILAKYQNQIMIIAIIILSGLIIVDIASEVFKKYARTREEKAGEYLTL
NYIFKYLVYVCVTLMIFGVIYQNVSSLVVSVGLIGAAVTYALQKPILNFAGWIIILYTRTIKIGDRIFIKNMGAGDVFDI
DTQHIYLSELTTDTFEPTGRVLIIPNSYIFTASIENLTKGSPYIWDNIVVHFTLNSNINKAEKIVFESADEVIGNLMREL
YEKWSKRKYLISRKLSDKPVVRVGITRSSFYIKALYLVNVYEKAKIRSEINKRILEKVNKENDVKLAYPHIKAVIETENK
FKNT

Sequences:

>Translated_324_residues
MIDNKLKLVIKVVLLIFLLHSLMSIFNLETYIKILAKYQNQIMIIAIIILSGLIIVDIASEVFKKYARTREEKAGEYLTL
NYIFKYLVYVCVTLMIFGVIYQNVSSLVVSVGLIGAAVTYALQKPILNFAGWIIILYTRTIKIGDRIFIKNMGAGDVFDI
DTQHIYLSELTTDTFEPTGRVLIIPNSYIFTASIENLTKGSPYIWDNIVVHFTLNSNINKAEKIVFESADEVIGNLMREL
YEKWSKRKYLISRKLSDKPVVRVGITRSSFYIKALYLVNVYEKAKIRSEINKRILEKVNKENDVKLAYPHIKAVIETENK
FKNT
>Mature_324_residues
MIDNKLKLVIKVVLLIFLLHSLMSIFNLETYIKILAKYQNQIMIIAIIILSGLIIVDIASEVFKKYARTREEKAGEYLTL
NYIFKYLVYVCVTLMIFGVIYQNVSSLVVSVGLIGAAVTYALQKPILNFAGWIIILYTRTIKIGDRIFIKNMGAGDVFDI
DTQHIYLSELTTDTFEPTGRVLIIPNSYIFTASIENLTKGSPYIWDNIVVHFTLNSNINKAEKIVFESADEVIGNLMREL
YEKWSKRKYLISRKLSDKPVVRVGITRSSFYIKALYLVNVYEKAKIRSEINKRILEKVNKENDVKLAYPHIKAVIETENK
FKNT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y700_METJA (Q58111)

Other databases:

- EMBL:   L77117
- PIR:   D64387
- RefSeq:   NP_247684.1
- ProteinModelPortal:   Q58111
- GeneID:   1451567
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0700
- NMPDR:   fig|243232.1.peg.721
- TIGR:   MJ0700
- HOGENOM:   HBG541133
- OMA:   ESWVELR
- ProtClustDB:   CLSK796526
- BioCyc:   MJAN243232:MJ_0700-MONOMER
- InterPro:   IPR010920
- InterPro:   IPR006685
- InterPro:   IPR011014

Pfam domain/function: PF00924 MS_channel; SSF82861 MscS_transmembr; SSF50182 Sm_like_riboprot

EC number: NA

Molecular weight: Translated: 37261; Mature: 37261

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc99fb80)-; HASH(0xbba76e8)-; HASH(0xd440008)-; HASH(0xd25f05c)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNKLKLVIKVVLLIFLLHSLMSIFNLETYIKILAKYQNQIMIIAIIILSGLIIVDIAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EVFKKYARTREEKAGEYLTLNYIFKYLVYVCVTLMIFGVIYQNVSSLVVSVGLIGAAVTY
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQKPILNFAGWIIILYTRTIKIGDRIFIKNMGAGDVFDIDTQHIYLSELTTDTFEPTGR
HHHHHHHHHHHHEEEEEEHEEEECCEEEEEECCCCCEEECCCCEEEEEHHCCCCCCCCCC
VLIIPNSYIFTASIENLTKGSPYIWDNIVVHFTLNSNINKAEKIVFESADEVIGNLMREL
EEEEECCEEEEEEHHHCCCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YEKWSKRKYLISRKLSDKPVVRVGITRSSFYIKALYLVNVYEKAKIRSEINKRILEKVNK
HHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ENDVKLAYPHIKAVIETENKFKNT
CCCEEEECHHHHHHEECCHHCCCH
>Mature Secondary Structure
MIDNKLKLVIKVVLLIFLLHSLMSIFNLETYIKILAKYQNQIMIIAIIILSGLIIVDIAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EVFKKYARTREEKAGEYLTLNYIFKYLVYVCVTLMIFGVIYQNVSSLVVSVGLIGAAVTY
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQKPILNFAGWIIILYTRTIKIGDRIFIKNMGAGDVFDIDTQHIYLSELTTDTFEPTGR
HHHHHHHHHHHHEEEEEEHEEEECCEEEEEECCCCCEEECCCCEEEEEHHCCCCCCCCCC
VLIIPNSYIFTASIENLTKGSPYIWDNIVVHFTLNSNINKAEKIVFESADEVIGNLMREL
EEEEECCEEEEEEHHHCCCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YEKWSKRKYLISRKLSDKPVVRVGITRSSFYIKALYLVNVYEKAKIRSEINKRILEKVNK
HHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ENDVKLAYPHIKAVIETENKFKNT
CCCEEEECHHHHHHEECCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087