Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668867

Identifier: 15668867

GI number: 15668867

Start: 613664

End: 615406

Strand: Reverse

Name: 15668867

Synonym: MJ0686

Alternate gene names: NA

Gene position: 615406-613664 (Counterclockwise)

Preceding gene: 15668868

Following gene: 15668865

Centisome position: 36.96

GC content: 27.14

Gene sequence:

>1743_bases
ATGGAGTTGAGTCATGATACAAAGAACCTTTTAGATTTAGTAAAAAAAGCATACGAAGGGGAAGTAGCACTCCCTGATTT
TCAGAGAAATTTTGTCTGGACAAGACAAGATATAGAAGAACTAATTAAATCTCTTTTGGAAAATATGTTTATAGGAACTT
TTTTAATCCAAGAAATAAATCCTGAAAATCCACCATTTGGGACAATCTACATTAGGGGGGCAGAGGAATTAAATCCTAAT
ATAACATTAAGAAAACCAAGAATTTTGGTTCTTGATGGTCAGCAAAGACTAACGTCATTATTTTATGCAATATATAGCCC
AAATTTTCCATTAAAAAATACTACAAAACCTTATGCGTTTTTTATAGATTTAAACAAATTAGTTGAAGATGATATTGATA
ATTCTGTTTTTAGCCTGTCTAAAGATTGTAGACAATATAAAGCTTTATTAAATGAAGATAATTCTTTCGATATAGAAAAA
TTAAAAGAAAAAAGATTTTTCCCATTAACATTTTTATCAAATTCAAATAAATTTTATAAGATATGGTATAAGCATTTTAG
TGAAATTTTTCCTGAAGAAGTATTTAATTATATGCATAACATATTGGAATATAAAGTTCCTACACTAATTTTAGGATTAT
CTTACAATGATAAACCCGAACAAGTTGTAGTGTTATTCGAAAGAATAAACAAAACTGGTATAAAATTATCGCCTTACGAT
TTATTGGTTGCAAGATTTTATAAATTTATAAAATTAAGGGAAAAGTGGGCAGAAGCGTTTGAAAATAACATTCGCATTAA
AAATTTTGCAGGTGATGTTGAGGATACAAAAGTGCCTTATATGTTTATTCAGGCATTAGCTTTAAGTAAAGGAATGAGCA
TCAAGTCAAGAGATTTAATTAAAATTGATAACTCCATTTTAAATGATGAATCATGGAATAGAGTTGTAGATATTGCTGAA
AATAAAGTATTTCAAAGAATTTTTGATATTAGCGAATATGGAATTGCAGATATTAAAAAATGGAATCCATATACACCAAC
AATAACGATGATGTTGGCATTCTTTTTAAAACATGATATTCCAGATATGGACAAAGTTAATAAATGGTATTGGAGTTCAG
TATTTTCTGAGAGATACTCGGGTTCTACAGAATCCAAGATGATGAAAGATTTTAAAGAAGTTTCACAATGGATTGAGAAC
AATAACAAAATTCCAGAAGTCGTTGAAAACTTAAAGATTGAAATACAATATGGAGCATACAGTTTAAAGAAAGTTAAAAG
TTCTGGAAGTTCAAAATATAAGGGAGTATTTAATTTGATATTTAAAAATAAACCAATGGATTTCTATAAGCCTGATAATA
TTGCCTACTATAAGCTTGAAGACCATCATATATTTCCTAAAGGATTTTTAAGAAATAAAGGCATATCCAATGAATATATA
GATTCAGTTTTAAATAAAACACCCATTCTTGATGAAACCAATAAGAAAATCTCAAAAAAATCACCATCCAAATATGTCAA
AGAAATGATAGAAATTCAGAAAAATAAAGGATTATCCGAAGATGAAGCAGTAAATAAAGTTAAAGAAATTCTAAAAGGGC
ATTTTATAAATGAAGAAATGTTTGAAATTCTAAGAAATACCGATGATTCATTATCAAAAGATGAAATTGAAGAGAACTTT
AATAGATTTATAGAGCTTAGAGAAAAATTAATCTTAGAGAAAATATTGGAATTAATATCTTAA

Upstream 100 bases:

>100_bases
CTTATAAAAATAGCAAACTCAATGATTGAATAAAAAATTTTATTTTTTATTTTTTTAATCGTTTGAAATACATGAGATTG
GCGATTATGAGGGTGAAAGT

Downstream 100 bases:

>100_bases
AATTTTTTATTAATTATCTTCTCAGCAATTTCCTCAACTTTTTTATAAACTTCATTATTTTCTGGAAGATTCCATAAAGG
AATGCCTTTTAAATCATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MELSHDTKNLLDLVKKAYEGEVALPDFQRNFVWTRQDIEELIKSLLENMFIGTFLIQEINPENPPFGTIYIRGAEELNPN
ITLRKPRILVLDGQQRLTSLFYAIYSPNFPLKNTTKPYAFFIDLNKLVEDDIDNSVFSLSKDCRQYKALLNEDNSFDIEK
LKEKRFFPLTFLSNSNKFYKIWYKHFSEIFPEEVFNYMHNILEYKVPTLILGLSYNDKPEQVVVLFERINKTGIKLSPYD
LLVARFYKFIKLREKWAEAFENNIRIKNFAGDVEDTKVPYMFIQALALSKGMSIKSRDLIKIDNSILNDESWNRVVDIAE
NKVFQRIFDISEYGIADIKKWNPYTPTITMMLAFFLKHDIPDMDKVNKWYWSSVFSERYSGSTESKMMKDFKEVSQWIEN
NNKIPEVVENLKIEIQYGAYSLKKVKSSGSSKYKGVFNLIFKNKPMDFYKPDNIAYYKLEDHHIFPKGFLRNKGISNEYI
DSVLNKTPILDETNKKISKKSPSKYVKEMIEIQKNKGLSEDEAVNKVKEILKGHFINEEMFEILRNTDDSLSKDEIEENF
NRFIELREKLILEKILELIS

Sequences:

>Translated_580_residues
MELSHDTKNLLDLVKKAYEGEVALPDFQRNFVWTRQDIEELIKSLLENMFIGTFLIQEINPENPPFGTIYIRGAEELNPN
ITLRKPRILVLDGQQRLTSLFYAIYSPNFPLKNTTKPYAFFIDLNKLVEDDIDNSVFSLSKDCRQYKALLNEDNSFDIEK
LKEKRFFPLTFLSNSNKFYKIWYKHFSEIFPEEVFNYMHNILEYKVPTLILGLSYNDKPEQVVVLFERINKTGIKLSPYD
LLVARFYKFIKLREKWAEAFENNIRIKNFAGDVEDTKVPYMFIQALALSKGMSIKSRDLIKIDNSILNDESWNRVVDIAE
NKVFQRIFDISEYGIADIKKWNPYTPTITMMLAFFLKHDIPDMDKVNKWYWSSVFSERYSGSTESKMMKDFKEVSQWIEN
NNKIPEVVENLKIEIQYGAYSLKKVKSSGSSKYKGVFNLIFKNKPMDFYKPDNIAYYKLEDHHIFPKGFLRNKGISNEYI
DSVLNKTPILDETNKKISKKSPSKYVKEMIEIQKNKGLSEDEAVNKVKEILKGHFINEEMFEILRNTDDSLSKDEIEENF
NRFIELREKLILEKILELIS
>Mature_580_residues
MELSHDTKNLLDLVKKAYEGEVALPDFQRNFVWTRQDIEELIKSLLENMFIGTFLIQEINPENPPFGTIYIRGAEELNPN
ITLRKPRILVLDGQQRLTSLFYAIYSPNFPLKNTTKPYAFFIDLNKLVEDDIDNSVFSLSKDCRQYKALLNEDNSFDIEK
LKEKRFFPLTFLSNSNKFYKIWYKHFSEIFPEEVFNYMHNILEYKVPTLILGLSYNDKPEQVVVLFERINKTGIKLSPYD
LLVARFYKFIKLREKWAEAFENNIRIKNFAGDVEDTKVPYMFIQALALSKGMSIKSRDLIKIDNSILNDESWNRVVDIAE
NKVFQRIFDISEYGIADIKKWNPYTPTITMMLAFFLKHDIPDMDKVNKWYWSSVFSERYSGSTESKMMKDFKEVSQWIEN
NNKIPEVVENLKIEIQYGAYSLKKVKSSGSSKYKGVFNLIFKNKPMDFYKPDNIAYYKLEDHHIFPKGFLRNKGISNEYI
DSVLNKTPILDETNKKISKKSPSKYVKEMIEIQKNKGLSEDEAVNKVKEILKGHFINEEMFEILRNTDDSLSKDEIEENF
NRFIELREKLILEKILELIS

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y686_METJA (Q58099)

Other databases:

- EMBL:   L77117
- PIR:   F64385
- RefSeq:   NP_247670.1
- ProteinModelPortal:   Q58099
- GeneID:   1451552
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0686
- NMPDR:   fig|243232.1.peg.707
- TIGR:   MJ0686
- HOGENOM:   HBG312446
- OMA:   VDIHHIF
- ProtClustDB:   CLSK796522
- BioCyc:   MJAN243232:MJ_0686-MONOMER
- InterPro:   IPR018651
- InterPro:   IPR004919

Pfam domain/function: PF09854 DUF2081; PF03235 DUF262

EC number: NA

Molecular weight: Translated: 68393; Mature: 68393

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSHDTKNLLDLVKKAYEGEVALPDFQRNFVWTRQDIEELIKSLLENMFIGTFLIQEIN
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHCC
PENPPFGTIYIRGAEELNPNITLRKPRILVLDGQQRLTSLFYAIYSPNFPLKNTTKPYAF
CCCCCEEEEEEECHHHCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEE
FIDLNKLVEDDIDNSVFSLSKDCRQYKALLNEDNSFDIEKLKEKRFFPLTFLSNSNKFYK
EEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCHHH
IWYKHFSEIFPEEVFNYMHNILEYKVPTLILGLSYNDKPEQVVVLFERINKTGIKLSPYD
HHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHH
LLVARFYKFIKLREKWAEAFENNIRIKNFAGDVEDTKVPYMFIQALALSKGMSIKSRDLI
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
KIDNSILNDESWNRVVDIAENKVFQRIFDISEYGIADIKKWNPYTPTITMMLAFFLKHDI
HHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCC
PDMDKVNKWYWSSVFSERYSGSTESKMMKDFKEVSQWIENNNKIPEVVENLKIEIQYGAY
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCH
SLKKVKSSGSSKYKGVFNLIFKNKPMDFYKPDNIAYYKLEDHHIFPKGFLRNKGISNEYI
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEECCCHHHHCCCCCHHHH
DSVLNKTPILDETNKKISKKSPSKYVKEMIEIQKNKGLSEDEAVNKVKEILKGHFINEEM
HHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
FEILRNTDDSLSKDEIEENFNRFIELREKLILEKILELIS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MELSHDTKNLLDLVKKAYEGEVALPDFQRNFVWTRQDIEELIKSLLENMFIGTFLIQEIN
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHCC
PENPPFGTIYIRGAEELNPNITLRKPRILVLDGQQRLTSLFYAIYSPNFPLKNTTKPYAF
CCCCCEEEEEEECHHHCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEE
FIDLNKLVEDDIDNSVFSLSKDCRQYKALLNEDNSFDIEKLKEKRFFPLTFLSNSNKFYK
EEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCHHH
IWYKHFSEIFPEEVFNYMHNILEYKVPTLILGLSYNDKPEQVVVLFERINKTGIKLSPYD
HHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHH
LLVARFYKFIKLREKWAEAFENNIRIKNFAGDVEDTKVPYMFIQALALSKGMSIKSRDLI
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
KIDNSILNDESWNRVVDIAENKVFQRIFDISEYGIADIKKWNPYTPTITMMLAFFLKHDI
HHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCC
PDMDKVNKWYWSSVFSERYSGSTESKMMKDFKEVSQWIENNNKIPEVVENLKIEIQYGAY
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCH
SLKKVKSSGSSKYKGVFNLIFKNKPMDFYKPDNIAYYKLEDHHIFPKGFLRNKGISNEYI
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEECCCHHHHCCCCCHHHH
DSVLNKTPILDETNKKISKKSPSKYVKEMIEIQKNKGLSEDEAVNKVKEILKGHFINEEM
HHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
FEILRNTDDSLSKDEIEENFNRFIELREKLILEKILELIS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087