Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668673

Identifier: 15668673

GI number: 15668673

Start: 438400

End: 438825

Strand: Direct

Name: 15668673

Synonym: MJ0496

Alternate gene names: NA

Gene position: 438400-438825 (Clockwise)

Preceding gene: 15668672

Following gene: 15668679

Centisome position: 26.33

GC content: 31.69

Gene sequence:

>426_bases
TTGGTGAGAGTTGTGTATGTTGTGAATCTACCATATAAAAAGTTGGGTGTAGAATGTGATGGAAAACAGCTAATTTTAAA
AATGAAATCTAAGGATGTTGAGGATAGTATAAAAATGAATTTTGAATCAGCTGCTTTATTAAAAATCTTGATGGAGCAGA
GTGCAGTGATAGCTGAGAAAATAAACAAGGACTTTAAAAAGGATAAAATTAAAGTGCATAATATACATGATGTTGGAACA
GTTTTTGGTGTTGATGGGAGAGTTTCAGTGGGGGTTTTACCAGCAGATGAAAATAGGGTAGCTTCAATTCTTGTTGGCTT
TCATAAGGATGACAAACATATATCAGTTGTAGTGAAACCAAAAAAGATTGCATTGTTGAGTGTTATTATAACAAAAATCA
TAAGCGAAAATCTAAAGTTAGATTAA

Upstream 100 bases:

>100_bases
GAGTAAGAAAATGGGGATAAATTCATAGGTATTAAAACCGCATCTTTTATATACTCAACACAACAAAAATAAATTTTACC
GATAAATTATTTTAGCTGTC

Downstream 100 bases:

>100_bases
ATCATCTATTTTTAACTGTTTTCCTCTACCTATAACTTCATAAAAATCAATAGCTATAGCTTTTATCCTTTCATCGATAA
CATAGTTTTTGCCATTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MVRVVYVVNLPYKKLGVECDGKQLILKMKSKDVEDSIKMNFESAALLKILMEQSAVIAEKINKDFKKDKIKVHNIHDVGT
VFGVDGRVSVGVLPADENRVASILVGFHKDDKHISVVVKPKKIALLSVIITKIISENLKLD

Sequences:

>Translated_141_residues
MVRVVYVVNLPYKKLGVECDGKQLILKMKSKDVEDSIKMNFESAALLKILMEQSAVIAEKINKDFKKDKIKVHNIHDVGT
VFGVDGRVSVGVLPADENRVASILVGFHKDDKHISVVVKPKKIALLSVIITKIISENLKLD
>Mature_141_residues
MVRVVYVVNLPYKKLGVECDGKQLILKMKSKDVEDSIKMNFESAALLKILMEQSAVIAEKINKDFKKDKIKVHNIHDVGT
VFGVDGRVSVGVLPADENRVASILVGFHKDDKHISVVVKPKKIALLSVIITKIISENLKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y496_METJA (Q57919)

Other databases:

- EMBL:   L77117
- PIR:   H64361
- RefSeq:   NP_247472.1
- GeneID:   1451358
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0496
- NMPDR:   fig|243232.1.peg.509
- TIGR:   MJ0496
- HOGENOM:   HBG539067
- OMA:   KPKRAAY
- ProtClustDB:   CLSK876209
- BioCyc:   MJAN243232:MJ_0496-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15692; Mature: 15692

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVVYVVNLPYKKLGVECDGKQLILKMKSKDVEDSIKMNFESAALLKILMEQSAVIAEK
CEEEEEEEECCHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
INKDFKKDKIKVHNIHDVGTVFGVDGRVSVGVLPADENRVASILVGFHKDDKHISVVVKP
HCCCCCCCCEEEEEEECCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
KKIALLSVIITKIISENLKLD
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVRVVYVVNLPYKKLGVECDGKQLILKMKSKDVEDSIKMNFESAALLKILMEQSAVIAEK
CEEEEEEEECCHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
INKDFKKDKIKVHNIHDVGTVFGVDGRVSVGVLPADENRVASILVGFHKDDKHISVVVKP
HCCCCCCCCEEEEEEECCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
KKIALLSVIITKIISENLKLD
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087