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The map label for this gene is rnp2

Identifier: 15668671

GI number: 15668671

Start: 436489

End: 436893

Strand: Direct

Name: rnp2

Synonym: MJ0494

Alternate gene names: 15668671

Gene position: 436489-436893 (Clockwise)

Preceding gene: 15668668

Following gene: 15668672

Centisome position: 26.22

GC content: 29.88

Gene sequence:

>405_bases
GTGATAGAAATGCTTAAAACACTACCACCAACTTTAAGGGAGAAAAAGAGATATATTGCATTTAAAATATTATACGATGA
GGAGTTAAAAGAGGGAGAGGTTGTTAATTTAATTAGAAAAGCTGTTTTAGAATATTATGGCTCTTGGGGAACATCCAAGG
CAAATCCATGGCTTGTTTATTATGATTTTCCTTATGGTATTTTGAGATGTCAAAGGGATAATGTTGATTATGTAAAAGCC
TCTTTAATTTTGATTAGGGAATTTAAAGAAAAGCCAGTAAATATTATCTGCTTAGGAGTTTCCGGGACAATAAGAAAGGC
AAAAATAAAATTTTTAGGAATAAAAAAACCAAAGAGATGGTTTGTAATTAGAAGAGAAAGGTTGAAAGCTAAAAAACAAA
AATAA

Upstream 100 bases:

>100_bases
GTTTTTAATTTTTTAATTTAATAAAACTTAAATAATAAAAACTTTTGTTAAAAAATATGTGTAGTATAAAAATTTCTAAA
TACAACACACTATTTATTGA

Downstream 100 bases:

>100_bases
ATAATTAATAAATAATTTGGTGATTTCTATGGAAATGAAAAATGTAAATGTTGGTTTGTTTGGGCATATTGACCATGGAA
AAACACAACTGGCAAAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: RNase P component 2

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGTSKANPWLVYYDFPYGILRCQRDNVDYVKA
SLILIREFKEKPVNIICLGVSGTIRKAKIKFLGIKKPKRWFVIRRERLKAKKQK

Sequences:

>Translated_134_residues
MIEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGTSKANPWLVYYDFPYGILRCQRDNVDYVKA
SLILIREFKEKPVNIICLGVSGTIRKAKIKFLGIKKPKRWFVIRRERLKAKKQK
>Mature_134_residues
MIEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGTSKANPWLVYYDFPYGILRCQRDNVDYVKA
SLILIREFKEKPVNIICLGVSGTIRKAKIKFLGIKKPKRWFVIRRERLKAKKQK

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1369

COG function: function code J; RNase P/RNase MRP subunit POP5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP2_METJA (Q57917)

Other databases:

- EMBL:   L77117
- PIR:   F64361
- RefSeq:   NP_247470.1
- ProteinModelPortal:   Q57917
- SMR:   Q57917
- GeneID:   1451356
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0494
- NMPDR:   fig|243232.1.peg.507
- TIGR:   MJ0494
- HOGENOM:   HBG551631
- OMA:   LKTLPPT
- ProtClustDB:   CLSK2517616
- BioCyc:   MJAN243232:MJ_0494-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00755
- InterPro:   IPR002759
- InterPro:   IPR016434
- PIRSF:   PIRSF004952

Pfam domain/function: PF01900 RNase_P_Rpp14

EC number: =3.1.26.5

Molecular weight: Translated: 15941; Mature: 15941

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGTSKANPWLVY
CCCCHHHCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEE
YDFPYGILRCQRDNVDYVKASLILIREFKEKPVNIICLGVSGTIRKAKIKFLGIKKPKRW
EECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCHH
FVIRRERLKAKKQK
HEEEHHHHHHCCCC
>Mature Secondary Structure
MIEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGTSKANPWLVY
CCCCHHHCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEE
YDFPYGILRCQRDNVDYVKASLILIREFKEKPVNIICLGVSGTIRKAKIKFLGIKKPKRW
EECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCHH
FVIRRERLKAKKQK
HEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087