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The map label for this gene is rpl30p

Identifier: 15668653

GI number: 15668653

Start: 419152

End: 419616

Strand: Direct

Name: rpl30p

Synonym: MJ0476

Alternate gene names: 15668653

Gene position: 419152-419616 (Clockwise)

Preceding gene: 15668652

Following gene: 15668654

Centisome position: 25.17

GC content: 32.26

Gene sequence:

>465_bases
ATGGCTTATGCTGTCATTAGGATAAGAGGGAGAGTTGGTGTAAGGAGAGATATAGCAGATACACTGAAAATGTTGAGATT
GCACAAAGTAAATCACTGTGTAATAATTCCAGAAACAGAAACATTTAAAGGAATGTTACAAAAAGTTAAAGACTACGTGA
CATGGGGAGAAATTGATAAAGATACATTGGTTAAATTAATTTTAAAGAGAGGAAGATTACCAGGAAATAAAAAAGTTAAT
CCAGAAATCATAAAGGAGCTTACAGGAATGGATGTTGAAGAATTGGCAGAAAAGATTATAAATGGAGAAATTAAATTAAA
AGAAACTCCATTAAAACCTGTATTCAGATTACACCCTCCAAGAAAAGGATTTGAAAGAGGAGGTATTAAAAAACCATTCA
GTGTTGGAGGAGCTTTAGGTTACAGAGGAGAGAAGATTAATGAGTTATTAGAAAAGATGATGTAA

Upstream 100 bases:

>100_bases
AGAAGTTGGGAATTGTTGAAGGAAGAGTCTTATAAATTAAATTTTTCTCATTTAAAACCAAGTGGCTATTTTAAAACTTT
TATTTTAATAAGGTGATAAT

Downstream 100 bases:

>100_bases
GGTGATGATTTATGATTAGAAAAAAGAAAAAAGTTAAAAAAATTAGAGGTTCAAGAACCTGTGGAGGAGGAAGCCACAAG
AAGAGAAGAGGGGCTGGAAA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAYAVIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLVKLILKRGRLPGNKKVN
PEIIKELTGMDVEELAEKIINGEIKLKETPLKPVFRLHPPRKGFERGGIKKPFSVGGALGYRGEKINELLEKMM

Sequences:

>Translated_154_residues
MAYAVIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLVKLILKRGRLPGNKKVN
PEIIKELTGMDVEELAEKIINGEIKLKETPLKPVFRLHPPRKGFERGGIKKPFSVGGALGYRGEKINELLEKMM
>Mature_153_residues
AYAVIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLVKLILKRGRLPGNKKVNP
EIIKELTGMDVEELAEKIINGEIKLKETPLKPVFRLHPPRKGFERGGIKKPFSVGGALGYRGEKINELLEKMM

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_METJA (P54046)

Other databases:

- EMBL:   L77117
- PIR:   D64359
- RefSeq:   NP_247452.1
- ProteinModelPortal:   P54046
- SMR:   P54046
- GeneID:   1451338
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0476
- NMPDR:   fig|243232.1.peg.489
- TIGR:   MJ0476
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- BioCyc:   MJAN243232:MJ_0476-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR018038
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 17586; Mature: 17455

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAVIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDK
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH
DTLVKLILKRGRLPGNKKVNPEIIKELTGMDVEELAEKIINGEIKLKETPLKPVFRLHPP
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCEECCCC
RKGFERGGIKKPFSVGGALGYRGEKINELLEKMM
CCCHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
AYAVIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDK
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH
DTLVKLILKRGRLPGNKKVNPEIIKELTGMDVEELAEKIINGEIKLKETPLKPVFRLHPP
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCEECCCC
RKGFERGGIKKPFSVGGALGYRGEKINELLEKMM
CCCHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087