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The map label for this gene is rnp1

Identifier: 15668641

GI number: 15668641

Start: 412639

End: 412926

Strand: Direct

Name: rnp1

Synonym: MJ0464

Alternate gene names: 15668641

Gene position: 412639-412926 (Clockwise)

Preceding gene: 15668640

Following gene: 15668642

Centisome position: 24.78

GC content: 35.42

Gene sequence:

>288_bases
ATGATAACTCCTCACAATATATTAAGGCATGAACTTATAGGGCTTAAAGTAGAGATTGTTGAAGCGAAGAACAAAGCGAT
GATAGGGATTAAAGGGAAAGTAGTGGATGAAACAAGAAATACATTAGTGATAGAAAAAGAGGATGGTAGGGAAGTAGTAA
TCCCAAAAGACATTGCAGTGTTTCTCTTTCAACTAAAGGGGTGCAAAGTAAAGGTCGATGGGAGATTGCTAATAGGGAGA
CCAGAAGAGAGATTAAAGAAAAAAATAAAGATACTATATCCATATTAG

Upstream 100 bases:

>100_bases
GTAAAACTTTAACTTTAAATTTATTTTAACTTTCTGAAATAAAGGGGACGCGGATGCCCCAGGAGGGCACACCCCGTCCC
CGTAAAACGGTTGGGGCATC

Downstream 100 bases:

>100_bases
GCTATTTTAGCCCCAACCGTTTGAGAATAATGATACAGTAGCCAAAAATTCCCTGGCTATTATTATATACTCTTTATCGT
ATCTTCCAGTCTGTGAGATT

Product: ribonuclease P protein component 1

Products: NA

Alternate protein names: RNase P component 1

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAVFLFQLKGCKVKVDGRLLIGR
PEERLKKKIKILYPY

Sequences:

>Translated_95_residues
MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAVFLFQLKGCKVKVDGRLLIGR
PEERLKKKIKILYPY
>Mature_95_residues
MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAVFLFQLKGCKVKVDGRLLIGR
PEERLKKKIKILYPY

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1588

COG function: function code J; RNase P/RNase MRP subunit p29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP1_METJA (Q57903)

Other databases:

- EMBL:   L77117
- PIR:   H64357
- RefSeq:   NP_247439.1
- ProteinModelPortal:   Q57903
- SMR:   Q57903
- GeneID:   1451326
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0464
- NMPDR:   fig|243232.1.peg.476
- TIGR:   MJ0464
- HOGENOM:   HBG704950
- OMA:   ISTKGRV
- ProtClustDB:   PRK03879
- BioCyc:   MJAN243232:MJ_0464-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00754
- InterPro:   IPR002730
- Gene3D:   G3DSA:2.30.30.210
- SMART:   SM00538

Pfam domain/function: PF01868 UPF0086; SSF101744 RNase_P_Rpp29

EC number: =3.1.26.5

Molecular weight: Translated: 10888; Mature: 10888

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAV
CCCCHHHHHHHHCCEEEEEEECCCCEEEEEECEEECCCCCEEEEECCCCCEEEECCHHEE
FLFQLKGCKVKVDGRLLIGRPEERLKKKIKILYPY
EEEEECCCEEEECCEEEEECCHHHHHCEEEEEECC
>Mature Secondary Structure
MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAV
CCCCHHHHHHHHCCEEEEEEECCCCEEEEEECEEECCCCCEEEEECCCCCEEEECCHHEE
FLFQLKGCKVKVDGRLLIGRPEERLKKKIKILYPY
EEEEECCCEEEECCEEEEECCHHHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087