| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668624
Identifier: 15668624
GI number: 15668624
Start: 401165
End: 401935
Strand: Direct
Name: 15668624
Synonym: MJ0448
Alternate gene names: NA
Gene position: 401165-401935 (Clockwise)
Preceding gene: 15668622
Following gene: 15668625
Centisome position: 24.09
GC content: 29.31
Gene sequence:
>771_bases ATGATTAAAATATTGGTAGATAACACTGCCTATAAAAAATTTTTTGCTCAACATGGATTTTCAGCTTTGATAGAAATAAA TAATAAGAGAATTTTATTTGATGCTGGACAAAACTCAATAACTTTGAGAGAGAATTTGAGATTATTTAATGAAAAAGAAG GATTTGATTATATTGTCTTATCTCATGGACATTACGACCACTGCGATGGTTTAAAATATGTTATAGAGAACGATTTAATC AATGGGAAAGTTATAGCTCACAAAGATGCATTCTTAGACAAATACGCTGGCAATAGATACATAGGGATTGACGAAGAAAT AAAAGAATATTTGTTAAAAAAAGCTGATTTAGAGATTATTGAAGAGCCGTATAAAATAGATAAAGATATTATTGTCTCTG GATATGTTCCAAGAGAATATGAATATGAGATGGAAGAGTTTCAGTGTATTAAAGATGGAAAGAGAGTAAAAGATGAGGTA AATGATGACATGTTCTTAATAGCTAAAGGAATTTTAATTACTGGCTGTTCTCATAGTGGAATTATAAATGTAGTTGAATA TGGGAAAAAATTAAGTGAAATTAAAGGAGTTTTGGGAGGTTTTCATTTAGTAGGGGTTTCAGATAACTATTTAAATAGGA TTGTTGATTATTTCAAATCTCAAGATTTTTGGATTATGCCTATGCACTGCACTGGATTCAAAGCTTTAACAAAATTATCT CAATTAAATAACTTTGTTTATGGGCATGTGGGGAAGATAATTGGGATTTAG
Upstream 100 bases:
>100_bases AATATTTATTTGATGATTAACTAATTTATCCTCAAATGCGGGAAAATATAAATCTGATGCTACACAAACATAACTGCTAT AAAAAATATTTGGTGACATC
Downstream 100 bases:
>100_bases GGGCTGATTATGAGAGAGGTAGAAAAGCCATTGATTTTGAGTATTGTTGGAAATATATTGTTGGGATTGATAAAAATAAT AATTGGATATGTTTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MIKILVDNTAYKKFFAQHGFSALIEINNKRILFDAGQNSITLRENLRLFNEKEGFDYIVLSHGHYDHCDGLKYVIENDLI NGKVIAHKDAFLDKYAGNRYIGIDEEIKEYLLKKADLEIIEEPYKIDKDIIVSGYVPREYEYEMEEFQCIKDGKRVKDEV NDDMFLIAKGILITGCSHSGIINVVEYGKKLSEIKGVLGGFHLVGVSDNYLNRIVDYFKSQDFWIMPMHCTGFKALTKLS QLNNFVYGHVGKIIGI
Sequences:
>Translated_256_residues MIKILVDNTAYKKFFAQHGFSALIEINNKRILFDAGQNSITLRENLRLFNEKEGFDYIVLSHGHYDHCDGLKYVIENDLI NGKVIAHKDAFLDKYAGNRYIGIDEEIKEYLLKKADLEIIEEPYKIDKDIIVSGYVPREYEYEMEEFQCIKDGKRVKDEV NDDMFLIAKGILITGCSHSGIINVVEYGKKLSEIKGVLGGFHLVGVSDNYLNRIVDYFKSQDFWIMPMHCTGFKALTKLS QLNNFVYGHVGKIIGI >Mature_256_residues MIKILVDNTAYKKFFAQHGFSALIEINNKRILFDAGQNSITLRENLRLFNEKEGFDYIVLSHGHYDHCDGLKYVIENDLI NGKVIAHKDAFLDKYAGNRYIGIDEEIKEYLLKKADLEIIEEPYKIDKDIIVSGYVPREYEYEMEEFQCIKDGKRVKDEV NDDMFLIAKGILITGCSHSGIINVVEYGKKLSEIKGVLGGFHLVGVSDNYLNRIVDYFKSQDFWIMPMHCTGFKALTKLS QLNNFVYGHVGKIIGI
Specific function: Unknown
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y448_METJA (Q57890)
Other databases:
- EMBL: L77117 - PIR: H64355 - RefSeq: NP_247422.1 - ProteinModelPortal: Q57890 - SMR: Q57890 - GeneID: 1451308 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0448 - NMPDR: fig|243232.1.peg.459 - TIGR: MJ0448 - HOGENOM: HBG729909 - OMA: HGHNDHT - ProtClustDB: CLSK876192 - BioCyc: MJAN243232:MJ_0448-MONOMER - InterPro: IPR001279 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 29409; Mature: 29409
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKILVDNTAYKKFFAQHGFSALIEINNKRILFDAGQNSITLRENLRLFNEKEGFDYIVL CEEEEECCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCEEEHHHHHHHCCCCCCCEEEE SHGHYDHCDGLKYVIENDLINGKVIAHKDAFLDKYAGNRYIGIDEEIKEYLLKKADLEII ECCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHH EEPYKIDKDIIVSGYVPREYEYEMEEFQCIKDGKRVKDEVNDDMFLIAKGILITGCSHSG HCCHHCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCEEEECCCCCC IINVVEYGKKLSEIKGVLGGFHLVGVSDNYLNRIVDYFKSQDFWIMPMHCTGFKALTKLS CHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH QLNNFVYGHVGKIIGI HHHHHHHHHHHHHHCC >Mature Secondary Structure MIKILVDNTAYKKFFAQHGFSALIEINNKRILFDAGQNSITLRENLRLFNEKEGFDYIVL CEEEEECCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCEEEHHHHHHHCCCCCCCEEEE SHGHYDHCDGLKYVIENDLINGKVIAHKDAFLDKYAGNRYIGIDEEIKEYLLKKADLEII ECCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHH EEPYKIDKDIIVSGYVPREYEYEMEEFQCIKDGKRVKDEVNDDMFLIAKGILITGCSHSG HCCHHCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCEEEECCCCCC IINVVEYGKKLSEIKGVLGGFHLVGVSDNYLNRIVDYFKSQDFWIMPMHCTGFKALTKLS CHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH QLNNFVYGHVGKIIGI HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087