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The map label for this gene is 15668590

Identifier: 15668590

GI number: 15668590

Start: 373413

End: 374600

Strand: Reverse

Name: 15668590

Synonym: MJ0414

Alternate gene names: NA

Gene position: 374600-373413 (Counterclockwise)

Preceding gene: 15668593

Following gene: 15668589

Centisome position: 22.5

GC content: 30.22

Gene sequence:

>1188_bases
ATGAGGTTGATAATGATGAAGGTTTCAGCATACGATTTAAATAAAATAGCAGAAAAACTCAATTTATCCATAAAAGATTT
AAATAAAGCATTTAGTAGGAAAATTTTAAGAGAGGATGAATATAAAGAAATAAAAACATTACTATTTAAAAAAGAATTTA
AAGGGATAGAGAAGGGGACAGTTATATTTTTAAACGACAACCTTGATGTTGTTAGAGGGTATCCAAAAACATACAGGGCT
ATAACTCTCTATCCTACAATAAAAAAACATTTTATTGATAAGGTTGTTATTGAAGAGAAATTGAACGGATATAATATAAG
AATCGTTAAAATAGATGGAGAGGTTTATGCCTTAACAAGAAGTGGCTACATCTGCCCATTTACAACAAAAAAAGTTAAAA
AATTCTTAAACTTAGAGATTTTAGATGACTATAGCGAGTATATGTTATGTGGAGAAATGATTGGCATAAACAACCCTTAC
ACACCTTACTATTACAAAGAGGTTGATAGGGGCTTTGAAAATCTTGGATTTTATATATTTGACATAAAGGAGAGGGAGAC
AAATAAATCCTTACCAATAAAAGAGAGAATAAACCTATGTGAAAAATATAATTTGCCTTATGTTAAGCCACTGGCTGTAG
TTGATAAAGATGAAGCTCATATACATGTAAGGGAAATCATTGAAAAGCTAAACAAAGAAGGAAGAGAAGGGGTTGTTTTA
AAAGACCCAGATATGGCTGTTTCACCAATAAAATACACAACTCACTATACTCAGTGTGAAGATTTAAAATCAGCCTTTAC
CTTTTTCTTTGATTTAGGAATGGACTTTTTATTCAGTAGGGTTGTGAGAGAGGGATTTATGAGTTATGAGTTTAAAGAAA
CTCTTGAAGAGAGAAAGAATAGGGCTAAAGATTTAGGAGAGGCAATTTTATTGCCAATGGTTGAAACAATTAATAAAGTA
GCCAGTGGGGAGAGGGTTTCTGAAGACTTTGAGCTTATATTTGATAGTGAAGAGGATTTTGATGAGTTTTTAGATTTTAT
GAGAAAGATGAAAATGGTTATAACAATAAAAAATATTGAAAAGATTGATACTGAGGAAGGTGTTAAAATTAAGGCAGTAA
TTGGGAAAATATACAATAAAACTAACGATAAAATTATTAGCTATTTAAATGGAACACTTTGGGAATAA

Upstream 100 bases:

>100_bases
CACTTCTTTACTACATAATTTATTAGAAATAATAATATCATGTTTATAGTTAAAGTTATTTATAAGTTATACATGAAGCC
ATAAAAACTTAGGTTCTGCA

Downstream 100 bases:

>100_bases
CAAAATTTAAATACCTCATAATGCTTTTAAAGTTTTATTAATTTTAAAAGATAACAAATTATATTGATATTTAATAAAAG
GTGATGAACCATAAAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRLIMMKVSAYDLNKIAEKLNLSIKDLNKAFSRKILREDEYKEIKTLLFKKEFKGIEKGTVIFLNDNLDVVRGYPKTYRA
ITLYPTIKKHFIDKVVIEEKLNGYNIRIVKIDGEVYALTRSGYICPFTTKKVKKFLNLEILDDYSEYMLCGEMIGINNPY
TPYYYKEVDRGFENLGFYIFDIKERETNKSLPIKERINLCEKYNLPYVKPLAVVDKDEAHIHVREIIEKLNKEGREGVVL
KDPDMAVSPIKYTTHYTQCEDLKSAFTFFFDLGMDFLFSRVVREGFMSYEFKETLEERKNRAKDLGEAILLPMVETINKV
ASGERVSEDFELIFDSEEDFDEFLDFMRKMKMVITIKNIEKIDTEEGVKIKAVIGKIYNKTNDKIISYLNGTLWE

Sequences:

>Translated_395_residues
MRLIMMKVSAYDLNKIAEKLNLSIKDLNKAFSRKILREDEYKEIKTLLFKKEFKGIEKGTVIFLNDNLDVVRGYPKTYRA
ITLYPTIKKHFIDKVVIEEKLNGYNIRIVKIDGEVYALTRSGYICPFTTKKVKKFLNLEILDDYSEYMLCGEMIGINNPY
TPYYYKEVDRGFENLGFYIFDIKERETNKSLPIKERINLCEKYNLPYVKPLAVVDKDEAHIHVREIIEKLNKEGREGVVL
KDPDMAVSPIKYTTHYTQCEDLKSAFTFFFDLGMDFLFSRVVREGFMSYEFKETLEERKNRAKDLGEAILLPMVETINKV
ASGERVSEDFELIFDSEEDFDEFLDFMRKMKMVITIKNIEKIDTEEGVKIKAVIGKIYNKTNDKIISYLNGTLWE
>Mature_395_residues
MRLIMMKVSAYDLNKIAEKLNLSIKDLNKAFSRKILREDEYKEIKTLLFKKEFKGIEKGTVIFLNDNLDVVRGYPKTYRA
ITLYPTIKKHFIDKVVIEEKLNGYNIRIVKIDGEVYALTRSGYICPFTTKKVKKFLNLEILDDYSEYMLCGEMIGINNPY
TPYYYKEVDRGFENLGFYIFDIKERETNKSLPIKERINLCEKYNLPYVKPLAVVDKDEAHIHVREIIEKLNKEGREGVVL
KDPDMAVSPIKYTTHYTQCEDLKSAFTFFFDLGMDFLFSRVVREGFMSYEFKETLEERKNRAKDLGEAILLPMVETINKV
ASGERVSEDFELIFDSEEDFDEFLDFMRKMKMVITIKNIEKIDTEEGVKIKAVIGKIYNKTNDKIISYLNGTLWE

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y414_METJA (Q57857)

Other databases:

- EMBL:   L77117
- PIR:   F64351
- RefSeq:   NP_247388.1
- ProteinModelPortal:   Q57857
- SMR:   Q57857
- GeneID:   1451274
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0414
- NMPDR:   fig|243232.1.peg.425
- TIGR:   MJ0414
- HOGENOM:   HBG541193
- OMA:   EEKMNGY
- ProtClustDB:   CLSK862643
- BioCyc:   MJAN243232:MJ_0414-MONOMER
- InterPro:   IPR012310
- InterPro:   IPR001072
- PRINTS:   PR01048
- TIGRFAMs:   TIGR01209

Pfam domain/function: PF01068 DNA_ligase_A_M

EC number: NA

Molecular weight: Translated: 46418; Mature: 46418

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIMMKVSAYDLNKIAEKLNLSIKDLNKAFSRKILREDEYKEIKTLLFKKEFKGIEKGT
CEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
VIFLNDNLDVVRGYPKTYRAITLYPTIKKHFIDKVVIEEKLNGYNIRIVKIDGEVYALTR
EEEEECCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEC
SGYICPFTTKKVKKFLNLEILDDYSEYMLCGEMIGINNPYTPYYYKEVDRGFENLGFYIF
CCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCEEEE
DIKERETNKSLPIKERINLCEKYNLPYVKPLAVVDKDEAHIHVREIIEKLNKEGREGVVL
EEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCEEE
KDPDMAVSPIKYTTHYTQCEDLKSAFTFFFDLGMDFLFSRVVREGFMSYEFKETLEERKN
ECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
RAKDLGEAILLPMVETINKVASGERVSEDFELIFDSEEDFDEFLDFMRKMKMVITIKNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHEEEEECHH
KIDTEEGVKIKAVIGKIYNKTNDKIISYLNGTLWE
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MRLIMMKVSAYDLNKIAEKLNLSIKDLNKAFSRKILREDEYKEIKTLLFKKEFKGIEKGT
CEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
VIFLNDNLDVVRGYPKTYRAITLYPTIKKHFIDKVVIEEKLNGYNIRIVKIDGEVYALTR
EEEEECCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEC
SGYICPFTTKKVKKFLNLEILDDYSEYMLCGEMIGINNPYTPYYYKEVDRGFENLGFYIF
CCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCEEEE
DIKERETNKSLPIKERINLCEKYNLPYVKPLAVVDKDEAHIHVREIIEKLNKEGREGVVL
EEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCEEE
KDPDMAVSPIKYTTHYTQCEDLKSAFTFFFDLGMDFLFSRVVREGFMSYEFKETLEERKN
ECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
RAKDLGEAILLPMVETINKVASGERVSEDFELIFDSEEDFDEFLDFMRKMKMVITIKNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHEEEEECHH
KIDTEEGVKIKAVIGKIYNKTNDKIISYLNGTLWE
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087