| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is manB
Identifier: 15668575
GI number: 15668575
Start: 360151
End: 361500
Strand: Reverse
Name: manB
Synonym: MJ0399
Alternate gene names: 15668575
Gene position: 361500-360151 (Counterclockwise)
Preceding gene: 15668577
Following gene: 15668573
Centisome position: 21.71
GC content: 29.41
Gene sequence:
>1350_bases GTGTTTGGTGATTTGATGGTATTTAAAGCCTATGATATTAGAGGAATCTATGGTAGAGAGTTAGATGAGAACTTTGCCTA TTCCTTAGGAAAGTGCATTGGTAAAAAATTTGAAAATAAAAAGATATTAGTTGGAAATGACGTTAGAATTGGTTCCAAAG AGCTTTTACCCTATTTTATAGTTGGTTTGAAAGAATATGCGGATGTATTTTATGCCGGAACTATTTCAACCCCTTTAATG TATTTCGGAACTAAAGGAAAATATGATTTAGGAGTTATATTAACAGCATCTCATAACCCTCCAGAATACACTGGATTTAA GATGTGTGATAAAGAAGCTATTCCTCTGTCACCAATAGAAGAGATAAAACCAATATTCAAAAAATATGAATTAACAGAAA GTATAAAAGAAGAAGCTAAAAACCTAAATTTAGATGATTTAAAGGTTAATATTATAGAGGAGTATAAAAAATTCTTTTTA AAGAGATGTAAAGCCTCAGATAAAAAAATAGCTGTAGATTTTGCAAATGGAGCTACTACAATAGCTGAAAAAGAAATTTT GAATGAATTGTTTGATAACGCAGTTTTTATAAATGATTATCCCGATGGCAATTTCCCTGCTCATCAACCAGACACACTAA AAATGGAATGCTTAAAAGATATTATAAGAGCAGTTAAAAAAAATAACTGTGAATTAGGTTTAATATTTGACGGAGATGGA GATAGGTTGGGAATAGTTGATGAAAACGGAAATGTTTTGAGGGGAGATATATTAACAGCCATAATAGCAAAAGAAATTTT AAAAGAAAAGTCAAATGCCAAAATTGTTTATGATTTAAGATGTTCTAAAATAGTTCCAGAAATTATTGAGAAGTATGGTG GCATAGCAATAAAAAGTAGAGTGGGGCATTACTTTATAAAAAAATTAATGCATGAAATAGATGCTGAATTTGCTGGAGAG TTGAGTAATCACTTTTACTTTAAAGAGATTGGCTACTTTGAAAGTCCATTACTGGCGTTAAATTATATCTTAAAAGCTAT GGATGAAGAAAATAAATCATTATCTGAACTAAATAAGGAATTTAGCAAATATCCTCATAGTGGAGAGATAAACTTTAGAG TTAAAGACCAAAAATATATTATGGAAAAAATAAAGGAACATTTTAAAGATTGCAAGTTAGAGGAGTTGGATGGAATATCT ATTTATTGTAAAAACTTCTGGTTTAATTTAAGACCTTCAAATACTGAACCATTATTAAGATTAAACTTAGAAGCAGATGA TGAGAAAACAATGAAAGAGAAGGTTGAAGAGATTAAAAATCTAATTGCAAAGCTTGATGCATCCTTATAA
Upstream 100 bases:
>100_bases AATAATTCCATATTCTCACATTTACAAATTTTTATTGTTTTATTTGATATTAATGTTAAAGTTTTAATATAGAAATATCA GATATCAATATTTAAAATTT
Downstream 100 bases:
>100_bases TTCATTTTTATGGTTGTGTCTTTAATATACACACAACCAAAACCTTTATATATTAGTTTGTAGTTATAGTAATTTCGCTT GTTTTGGATTAAAAGTTGAG
Product: phosphomannomutase PmmA
Products: NA
Alternate protein names: PMM
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MFGDLMVFKAYDIRGIYGRELDENFAYSLGKCIGKKFENKKILVGNDVRIGSKELLPYFIVGLKEYADVFYAGTISTPLM YFGTKGKYDLGVILTASHNPPEYTGFKMCDKEAIPLSPIEEIKPIFKKYELTESIKEEAKNLNLDDLKVNIIEEYKKFFL KRCKASDKKIAVDFANGATTIAEKEILNELFDNAVFINDYPDGNFPAHQPDTLKMECLKDIIRAVKKNNCELGLIFDGDG DRLGIVDENGNVLRGDILTAIIAKEILKEKSNAKIVYDLRCSKIVPEIIEKYGGIAIKSRVGHYFIKKLMHEIDAEFAGE LSNHFYFKEIGYFESPLLALNYILKAMDEENKSLSELNKEFSKYPHSGEINFRVKDQKYIMEKIKEHFKDCKLEELDGIS IYCKNFWFNLRPSNTEPLLRLNLEADDEKTMKEKVEEIKNLIAKLDASL
Sequences:
>Translated_449_residues MFGDLMVFKAYDIRGIYGRELDENFAYSLGKCIGKKFENKKILVGNDVRIGSKELLPYFIVGLKEYADVFYAGTISTPLM YFGTKGKYDLGVILTASHNPPEYTGFKMCDKEAIPLSPIEEIKPIFKKYELTESIKEEAKNLNLDDLKVNIIEEYKKFFL KRCKASDKKIAVDFANGATTIAEKEILNELFDNAVFINDYPDGNFPAHQPDTLKMECLKDIIRAVKKNNCELGLIFDGDG DRLGIVDENGNVLRGDILTAIIAKEILKEKSNAKIVYDLRCSKIVPEIIEKYGGIAIKSRVGHYFIKKLMHEIDAEFAGE LSNHFYFKEIGYFESPLLALNYILKAMDEENKSLSELNKEFSKYPHSGEINFRVKDQKYIMEKIKEHFKDCKLEELDGIS IYCKNFWFNLRPSNTEPLLRLNLEADDEKTMKEKVEEIKNLIAKLDASL >Mature_449_residues MFGDLMVFKAYDIRGIYGRELDENFAYSLGKCIGKKFENKKILVGNDVRIGSKELLPYFIVGLKEYADVFYAGTISTPLM YFGTKGKYDLGVILTASHNPPEYTGFKMCDKEAIPLSPIEEIKPIFKKYELTESIKEEAKNLNLDDLKVNIIEEYKKFFL KRCKASDKKIAVDFANGATTIAEKEILNELFDNAVFINDYPDGNFPAHQPDTLKMECLKDIIRAVKKNNCELGLIFDGDG DRLGIVDENGNVLRGDILTAIIAKEILKEKSNAKIVYDLRCSKIVPEIIEKYGGIAIKSRVGHYFIKKLMHEIDAEFAGE LSNHFYFKEIGYFESPLLALNYILKAMDEENKSLSELNKEFSKYPHSGEINFRVKDQKYIMEKIKEHFKDCKLEELDGIS IYCKNFWFNLRPSNTEPLLRLNLEADDEKTMKEKVEEIKNLIAKLDASL
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1788361, Length=455, Percent_Identity=31.4285714285714, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=26.457399103139, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MANB_METJA (Q57842)
Other databases:
- EMBL: L77117 - PIR: G64349 - RefSeq: NP_247373.1 - ProteinModelPortal: Q57842 - SMR: Q57842 - GeneID: 1451259 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0399 - NMPDR: fig|243232.1.peg.410 - TIGR: MJ0399 - HOGENOM: HBG644964 - OMA: RDAYIGH - ProtClustDB: CLSK876169 - BioCyc: MJAN243232:MJ_0399-MONOMER - BRENDA: 5.4.2.8 - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.8
Molecular weight: Translated: 51474; Mature: 51474
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 97-97
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGDLMVFKAYDIRGIYGRELDENFAYSLGKCIGKKFENKKILVGNDVRIGSKELLPYFI CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH VGLKEYADVFYAGTISTPLMYFGTKGKYDLGVILTASHNPPEYTGFKMCDKEAIPLSPIE HHHHHHHHHEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH EIKPIFKKYELTESIKEEAKNLNLDDLKVNIIEEYKKFFLKRCKASDKKIAVDFANGATT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH IAEKEILNELFDNAVFINDYPDGNFPAHQPDTLKMECLKDIIRAVKKNNCELGLIFDGDG HHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC DRLGIVDENGNVLRGDILTAIIAKEILKEKSNAKIVYDLRCSKIVPEIIEKYGGIAIKSR CEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEEEHH VGHYFIKKLMHEIDAEFAGELSNHFYFKEIGYFESPLLALNYILKAMDEENKSLSELNKE HHHHHHHHHHHHHCHHHHHHHHCCEEEHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH FSKYPHSGEINFRVKDQKYIMEKIKEHFKDCKLEELDGISIYCKNFWFNLRPSNTEPLLR HHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHCCCCEEEEECCEEEECCCCCCCEEE LNLEADDEKTMKEKVEEIKNLIAKLDASL EECCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGDLMVFKAYDIRGIYGRELDENFAYSLGKCIGKKFENKKILVGNDVRIGSKELLPYFI CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH VGLKEYADVFYAGTISTPLMYFGTKGKYDLGVILTASHNPPEYTGFKMCDKEAIPLSPIE HHHHHHHHHEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH EIKPIFKKYELTESIKEEAKNLNLDDLKVNIIEEYKKFFLKRCKASDKKIAVDFANGATT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH IAEKEILNELFDNAVFINDYPDGNFPAHQPDTLKMECLKDIIRAVKKNNCELGLIFDGDG HHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC DRLGIVDENGNVLRGDILTAIIAKEILKEKSNAKIVYDLRCSKIVPEIIEKYGGIAIKSR CEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEEEHH VGHYFIKKLMHEIDAEFAGELSNHFYFKEIGYFESPLLALNYILKAMDEENKSLSELNKE HHHHHHHHHHHHHCHHHHHHHHCCEEEHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH FSKYPHSGEINFRVKDQKYIMEKIKEHFKDCKLEELDGISIYCKNFWFNLRPSNTEPLLR HHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHCCCCEEEEECCEEEECCCCCCCEEE LNLEADDEKTMKEKVEEIKNLIAKLDASL EECCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087