| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668556
Identifier: 15668556
GI number: 15668556
Start: 345618
End: 345974
Strand: Direct
Name: 15668556
Synonym: MJ0380
Alternate gene names: NA
Gene position: 345618-345974 (Clockwise)
Preceding gene: 15668554
Following gene: 15668557
Centisome position: 20.76
GC content: 35.01
Gene sequence:
>357_bases GTGTCAATAGATGAGGTGATAAAGTTGGAGAATTGGATGAAAAATATTGGAAGATATCTTAGCTACCTTATAAGCGATAA GTTTGAGGAATATGCTTATGACATCATTGATGGAGTAGCTAAAGCAAGAAATGCAAATGAACTTTTAGAAGCGTTATATA AAGGATTAAGATTGTCCCCAAAACTAAAAAAGAAAGGAAATATTGAAGTCCCATCTCCAGAGGACGTAAAAAAGTTGGAA GAAACTTTGAGAGAAATCGGAGATAATGAAAAGGAAGTTAGAAAAATTGGATTAAGCATGGCACTCTGGGCTTTTGCAGA CTGGGAAAAAGACCACAGAAAAAGAGGTGATCAGTAA
Upstream 100 bases:
>100_bases CTTATGTATATATTTTACTTCGAAGTAATATATAAATACTTTGTATACTTCTACGAAATTCCTTAGTAAAGTTTATATTT TCCCATATTAATATTATGTA
Downstream 100 bases:
>100_bases TGTTCTTGAGAATCTCAGGAAGAGTTAGGTTGAATTCCCATTCTTTAAATGCCCAAGGTGGGGGAGGAACAAATTATGTG GAGATAACAAAAGCTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSIDEVIKLENWMKNIGRYLSYLISDKFEEYAYDIIDGVAKARNANELLEALYKGLRLSPKLKKKGNIEVPSPEDVKKLE ETLREIGDNEKEVRKIGLSMALWAFADWEKDHRKRGDQ
Sequences:
>Translated_118_residues MSIDEVIKLENWMKNIGRYLSYLISDKFEEYAYDIIDGVAKARNANELLEALYKGLRLSPKLKKKGNIEVPSPEDVKKLE ETLREIGDNEKEVRKIGLSMALWAFADWEKDHRKRGDQ >Mature_117_residues SIDEVIKLENWMKNIGRYLSYLISDKFEEYAYDIIDGVAKARNANELLEALYKGLRLSPKLKKKGNIEVPSPEDVKKLEE TLREIGDNEKEVRKIGLSMALWAFADWEKDHRKRGDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y380_METJA (Q57825)
Other databases:
- EMBL: L77117 - PIR: D64347 - RefSeq: NP_247354.1 - GeneID: 1451237 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0380 - NMPDR: fig|243232.1.peg.391 - TIGR: MJ0380 - HOGENOM: HBG539052 - OMA: NIGRYLS - ProtClustDB: CLSK213990 - BioCyc: MJAN243232:MJ_0380-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13758; Mature: 13627
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDEVIKLENWMKNIGRYLSYLISDKFEEYAYDIIDGVAKARNANELLEALYKGLRLSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KLKKKGNIEVPSPEDVKKLEETLREIGDNEKEVRKIGLSMALWAFADWEKDHRKRGDQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SIDEVIKLENWMKNIGRYLSYLISDKFEEYAYDIIDGVAKARNANELLEALYKGLRLSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KLKKKGNIEVPSPEDVKKLEETLREIGDNEKEVRKIGLSMALWAFADWEKDHRKRGDQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087