| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is ybjG [C]
Identifier: 15668550
GI number: 15668550
Start: 338878
End: 339870
Strand: Reverse
Name: ybjG [C]
Synonym: MJ0374
Alternate gene names: 15668550
Gene position: 339870-338878 (Counterclockwise)
Preceding gene: 15668555
Following gene: 15668545
Centisome position: 20.41
GC content: 28.6
Gene sequence:
>993_bases ATGATATCTGGTGGTTATATGGATTTATACGCTATGGCTGAATATCTTGTAAATAATTATGGTTACATTGGGATATTTAT AATTTCATTTACAGAGGCATTTATACAACCAATTCCCCCAGATGTTTTTATAATTGGGGCATCTTTTTTTGGTTTAAATC CAATAATCTCTGCTATAGTAGCAACAATTGGCACAACTTTAGGAGGTTTGTTTGGCTACTTCTTAGGGGATAAATTAGGG CATCCAATATTTATAAAACTTTTTGGAGAGAAATATCTGCATAAAGGAGAAGAATTTTTTAACAAATATGGAGTTTATGG AGTTGTAATTGCGGGTTTCTCCCCCTTACCATATAAAGTTATTGCATGGCTATCTGGAATTTTTGAAATGCATAAATTAT TATTTACAGTTGGAACAATAATTGGAAGATTACCAAGATTTTTGGCAGTTGCATATTTTGGAGATGTTTTGGGAAATATA AATAGATTAAGTGATATAAATATTTATTTATTCTATTTAATAAATTCTCACTATAATTATATATTTGATGCAATTATGCC AATCATCTCTAAAACAGCATATCCTTTAATTGCAATCACATCCTTAATAATATTTATAAAAAATAGAAAATTCGGGATGA AATTAATCTTCGCCTTATTTTTAGCTTTTATGATTGCATTTTCATTAAAATATTTAGTAAATGAGCCAAGGCCTTATTTA GTTTTAGATAATGTGCATTTGTTATGCAATGAAGGAAATGAGCCAAGCTTTCCAAGTGGTCATACAACTTTAGCATTTAC ATTAGCAACATCCTTATTATTTTACTCAAAAAAACTTGGAATATTGTTTTTAAGTTGGGCTATAATTGTAGCTTATAGTA GAGTTTATGTTGGAGTTCATTATCCTTTGGATGTCCTTGCTGGAATGATTATTGGAATTTTCTGTGGATGTTTAACAAGA ATAGATATATACAAATTAATAGATAATATCTAA
Upstream 100 bases:
>100_bases TACTGTGAAGTTGTCTGTCTGTAACTCTAACTCAATTCTCATACTCTCCCTCATAAAATATTTAAATAAACAATAACACT TTATTAACCTTAGGAAATTA
Downstream 100 bases:
>100_bases AAAATACATAAAAACCAGAATATTATCAAAAGAAAAATAAAAAAGGAAAAATCAATTTATTCTTCTTTAAAGTATTCATC ATAAACTCCAGCATCAATCT
Product: lipoprotein B LppB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MISGGYMDLYAMAEYLVNNYGYIGIFIISFTEAFIQPIPPDVFIIGASFFGLNPIISAIVATIGTTLGGLFGYFLGDKLG HPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLPYKVIAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNI NRLSDINIYLFYLINSHYNYIFDAIMPIISKTAYPLIAITSLIIFIKNRKFGMKLIFALFLAFMIAFSLKYLVNEPRPYL VLDNVHLLCNEGNEPSFPSGHTTLAFTLATSLLFYSKKLGILFLSWAIIVAYSRVYVGVHYPLDVLAGMIIGIFCGCLTR IDIYKLIDNI
Sequences:
>Translated_330_residues MISGGYMDLYAMAEYLVNNYGYIGIFIISFTEAFIQPIPPDVFIIGASFFGLNPIISAIVATIGTTLGGLFGYFLGDKLG HPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLPYKVIAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNI NRLSDINIYLFYLINSHYNYIFDAIMPIISKTAYPLIAITSLIIFIKNRKFGMKLIFALFLAFMIAFSLKYLVNEPRPYL VLDNVHLLCNEGNEPSFPSGHTTLAFTLATSLLFYSKKLGILFLSWAIIVAYSRVYVGVHYPLDVLAGMIIGIFCGCLTR IDIYKLIDNI >Mature_330_residues MISGGYMDLYAMAEYLVNNYGYIGIFIISFTEAFIQPIPPDVFIIGASFFGLNPIISAIVATIGTTLGGLFGYFLGDKLG HPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLPYKVIAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNI NRLSDINIYLFYLINSHYNYIFDAIMPIISKTAYPLIAITSLIIFIKNRKFGMKLIFALFLAFMIAFSLKYLVNEPRPYL VLDNVHLLCNEGNEPSFPSGHTTLAFTLATSLLFYSKKLGILFLSWAIIVAYSRVYVGVHYPLDVLAGMIIGIFCGCLTR IDIYKLIDNI
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787064, Length=171, Percent_Identity=30.4093567251462, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y374_METJA (Q57819)
Other databases:
- EMBL: L77117 - PIR: F64346 - RefSeq: NP_247348.1 - ProteinModelPortal: Q57819 - SMR: Q57819 - GeneID: 1451231 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0374 - NMPDR: fig|243232.1.peg.385 - TIGR: MJ0374 - OMA: SFTEAFI - ProtClustDB: CLSK2517600 - BioCyc: MJAN243232:MJ_0374-MONOMER - GO: GO:0016020 - InterPro: IPR016118 - InterPro: IPR000326 - InterPro: IPR015414 - Gene3D: G3DSA:1.20.144.10 - SMART: SM00014
Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc; SSF48317 AcPase_VanPerase
EC number: NA
Molecular weight: Translated: 37019; Mature: 37019
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGGYMDLYAMAEYLVNNYGYIGIFIISFTEAFIQPIPPDVFIIGASFFGLNPIISAIV CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHCHHHHHHHHH ATIGTTLGGLFGYFLGDKLGHPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLPYKV HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH IAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNINRLSDINIYLFYLINSHYNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHH IFDAIMPIISKTAYPLIAITSLIIFIKNRKFGMKLIFALFLAFMIAFSLKYLVNEPRPYL HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VLDNVHLLCNEGNEPSFPSGHTTLAFTLATSLLFYSKKLGILFLSWAIIVAYSRVYVGVH EECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC YPLDVLAGMIIGIFCGCLTRIDIYKLIDNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISGGYMDLYAMAEYLVNNYGYIGIFIISFTEAFIQPIPPDVFIIGASFFGLNPIISAIV CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHCHHHHHHHHH ATIGTTLGGLFGYFLGDKLGHPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLPYKV HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH IAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNINRLSDINIYLFYLINSHYNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHH IFDAIMPIISKTAYPLIAITSLIIFIKNRKFGMKLIFALFLAFMIAFSLKYLVNEPRPYL HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VLDNVHLLCNEGNEPSFPSGHTTLAFTLATSLLFYSKKLGILFLSWAIIVAYSRVYVGVH EECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC YPLDVLAGMIIGIFCGCLTRIDIYKLIDNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087