Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668537

Identifier: 15668537

GI number: 15668537

Start: 329176

End: 329499

Strand: Reverse

Name: 15668537

Synonym: MJ0361

Alternate gene names: NA

Gene position: 329499-329176 (Counterclockwise)

Preceding gene: 15668545

Following gene: 15668536

Centisome position: 19.79

GC content: 26.23

Gene sequence:

>324_bases
ATGATACTCAAAATACTGGCAAAAAAACACGTAAAGGATGTTTTAAAATTACTAAATAGTAAAGATATGTATTTTAGTGA
ATTACAGAAGACTTTAAATTTACATCCAAAAATTTTGGACTCAATATTATCTGATTTAGTTAATGAAGGTTTCGTTGAAA
AAAGAGAAGGAGAATCTCCTTATAAATTTGGAAAAGTATATTATTCAATAACCCCAAGAGGTAAAAGAGCTTTAGAAATA
TTAGATCTTATTGAAACTTTCGATACTCTTAGAGAAGGCCAAGACATCGTTATTAATTATAAAATTGTAAATTCAACTGC
ATAA

Upstream 100 bases:

>100_bases
TATATATTTTTTGGTGATTCATCACGCTTTGGTGAATAATCACATAAATAAAAGTAGTTGTAAAAAATTACAATAAAAAC
AAAAAGAGGCAGGTCATATT

Downstream 100 bases:

>100_bases
ATTACTTCTATAGGATACTATGGCTCTAATATCGTATTTAGAGATGGACACATATTTGCCTTATTTGGCTCAAAACTCAT
AGGATTACGGTTTATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MILKILAKKHVKDVLKLLNSKDMYFSELQKTLNLHPKILDSILSDLVNEGFVEKREGESPYKFGKVYYSITPRGKRALEI
LDLIETFDTLREGQDIVINYKIVNSTA

Sequences:

>Translated_107_residues
MILKILAKKHVKDVLKLLNSKDMYFSELQKTLNLHPKILDSILSDLVNEGFVEKREGESPYKFGKVYYSITPRGKRALEI
LDLIETFDTLREGQDIVINYKIVNSTA
>Mature_107_residues
MILKILAKKHVKDVLKLLNSKDMYFSELQKTLNLHPKILDSILSDLVNEGFVEKREGESPYKFGKVYYSITPRGKRALEI
LDLIETFDTLREGQDIVINYKIVNSTA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y361_METJA (Q57807)

Other databases:

- EMBL:   L77117
- PIR:   A64345
- RefSeq:   NP_247335.1
- ProteinModelPortal:   Q57807
- SMR:   Q57807
- GeneID:   1451218
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0361
- NMPDR:   fig|243232.1.peg.372
- TIGR:   MJ0361
- HOGENOM:   HBG752497
- OMA:   NKRTEET
- ProtClustDB:   CLSK2517598
- BioCyc:   MJAN243232:MJ_0361-MONOMER
- GO:   GO:0006350
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR

EC number: NA

Molecular weight: Translated: 12344; Mature: 12344

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00846 HTH_ARSR_1; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKILAKKHVKDVLKLLNSKDMYFSELQKTLNLHPKILDSILSDLVNEGFVEKREGESP
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
YKFGKVYYSITPRGKRALEILDLIETFDTLREGQDIVINYKIVNSTA
CEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCC
>Mature Secondary Structure
MILKILAKKHVKDVLKLLNSKDMYFSELQKTLNLHPKILDSILSDLVNEGFVEKREGESP
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
YKFGKVYYSITPRGKRALEILDLIETFDTLREGQDIVINYKIVNSTA
CEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087