| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668528
Identifier: 15668528
GI number: 15668528
Start: 323179
End: 323898
Strand: Reverse
Name: 15668528
Synonym: MJ0352
Alternate gene names: NA
Gene position: 323898-323179 (Counterclockwise)
Preceding gene: 15668529
Following gene: 15668527
Centisome position: 19.45
GC content: 37.78
Gene sequence:
>720_bases ATGTGCAAGTATGAGTTAGCTGCAAAGGCTCATAAGAATGTGTATGGTGTAGAGATTGAAGTTGAGGAGATTAAAAAGCA AGTTGAAGAAATCAGAAAGGAGCATAATAATTGGATTGATGAAAGTGCGGCATTTGTCAAATGGTTAGAAACCTTGGAGC TTAAGGATGAATTTAAAAAGCTTAGGGAGGAGGAGAGGATGAATAAGAATGGGAATAGTATTGAGGTTAAGGCATCAAAC AATGCAATGGTGGTCTTAGAGAAAACTGCTGAAAAGGTTGATTCGTTGGATGATGTTATTGAAAAGATGGATTCGTTGGA TGAGGATTTAATGTTACTGGATGAAGCTAATGAGCATCTACCTTTGGCATATACTTATCCTGATAAAAAAACAGGAAAGG AGAAGATAATTCTCTCATGGGCAGGAATTGTTAAAGCAATGAGGATGCAGGGAAATATTGAGGTAGAGCCCCCAACTTTC CAAGAGGTTAATGGAAAAATTATAGCAACGTGTAGGGTCAGGGATTTGAAGAGAAACATCGTTATGGTAGGTACTGCTGA AAGGGTAAGTCCTGGTAGAATGGGAGAGGAGTTTAAATATACTGTCTTAGCTTCAAAGGCGATAAGGAACGCACTAAAGC ACATTATTGAGCCAAAGTATTTGCAGATGGTAATAGCTGAAGCTAAAAAGAGAAAGTCGTATGTGATTATCACTTATTAA
Upstream 100 bases:
>100_bases GTGAAGGTTGGGAAAAAGTTGTTTAAAAGGTTGAGGAGGCAGATTTTGGAGGGAGAGAAAAAGGATTTTGGCATGTTGAA AGTTAATCGGAGGGATTTGA
Downstream 100 bases:
>100_bases TTTTTTTAAAATTTTTTTGGTGATGATATGGTGGAAAAAATGAGTCCCAAAACTTTTGGAGGTGAAATCATGGAGAATTC TGATATAAGGGCTAAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MCKYELAAKAHKNVYGVEIEVEEIKKQVEEIRKEHNNWIDESAAFVKWLETLELKDEFKKLREEERMNKNGNSIEVKASN NAMVVLEKTAEKVDSLDDVIEKMDSLDEDLMLLDEANEHLPLAYTYPDKKTGKEKIILSWAGIVKAMRMQGNIEVEPPTF QEVNGKIIATCRVRDLKRNIVMVGTAERVSPGRMGEEFKYTVLASKAIRNALKHIIEPKYLQMVIAEAKKRKSYVIITY
Sequences:
>Translated_239_residues MCKYELAAKAHKNVYGVEIEVEEIKKQVEEIRKEHNNWIDESAAFVKWLETLELKDEFKKLREEERMNKNGNSIEVKASN NAMVVLEKTAEKVDSLDDVIEKMDSLDEDLMLLDEANEHLPLAYTYPDKKTGKEKIILSWAGIVKAMRMQGNIEVEPPTF QEVNGKIIATCRVRDLKRNIVMVGTAERVSPGRMGEEFKYTVLASKAIRNALKHIIEPKYLQMVIAEAKKRKSYVIITY >Mature_239_residues MCKYELAAKAHKNVYGVEIEVEEIKKQVEEIRKEHNNWIDESAAFVKWLETLELKDEFKKLREEERMNKNGNSIEVKASN NAMVVLEKTAEKVDSLDDVIEKMDSLDEDLMLLDEANEHLPLAYTYPDKKTGKEKIILSWAGIVKAMRMQGNIEVEPPTF QEVNGKIIATCRVRDLKRNIVMVGTAERVSPGRMGEEFKYTVLASKAIRNALKHIIEPKYLQMVIAEAKKRKSYVIITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y352_METJA (Q57798)
Other databases:
- EMBL: L77117 - PIR: H64343 - RefSeq: NP_247326.1 - ProteinModelPortal: Q57798 - GeneID: 1451209 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0352 - NMPDR: fig|243232.1.peg.363 - TIGR: MJ0352 - OMA: EANEHLP - ProtClustDB: CLSK2517593 - BioCyc: MJAN243232:MJ_0352-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27547; Mature: 27547
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKYELAAKAHKNVYGVEIEVEEIKKQVEEIRKEHNNWIDESAAFVKWLETLELKDEFKK CCCCHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LREEERMNKNGNSIEVKASNNAMVVLEKTAEKVDSLDDVIEKMDSLDEDLMLLDEANEHL HHHHHHHCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC PLAYTYPDKKTGKEKIILSWAGIVKAMRMQGNIEVEPPTFQEVNGKIIATCRVRDLKRNI CEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCEEECCCCHHHCCCEEEEEEEEEHHHCCE VMVGTAERVSPGRMGEEFKYTVLASKAIRNALKHIIEPKYLQMVIAEAKKRKSYVIITY EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MCKYELAAKAHKNVYGVEIEVEEIKKQVEEIRKEHNNWIDESAAFVKWLETLELKDEFKK CCCCHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LREEERMNKNGNSIEVKASNNAMVVLEKTAEKVDSLDDVIEKMDSLDEDLMLLDEANEHL HHHHHHHCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC PLAYTYPDKKTGKEKIILSWAGIVKAMRMQGNIEVEPPTFQEVNGKIIATCRVRDLKRNI CEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCEEECCCCHHHCCCEEEEEEEEEHHHCCE VMVGTAERVSPGRMGEEFKYTVLASKAIRNALKHIIEPKYLQMVIAEAKKRKSYVIITY EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087