Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668526

Identifier: 15668526

GI number: 15668526

Start: 322412

End: 322678

Strand: Reverse

Name: 15668526

Synonym: MJ0350

Alternate gene names: NA

Gene position: 322678-322412 (Counterclockwise)

Preceding gene: 15668527

Following gene: 15668525

Centisome position: 19.38

GC content: 27.34

Gene sequence:

>267_bases
ATGGCAAAAGTTAGGCATGGTTGTAGAACTGAGAGAATAGAGTTGATTATTAAAATAAATCATTTGAAAAGAGAAAATCT
AAAGCTTAGAAATAAAATAGCTGATTATAAGAGAACTTTATATTTAATTAGAGGTAAGGGCTGTAAATTAACAGAAGAGT
TATTAAAGATTGAGATTGAGAATTGTATTAAGATGATAAAGTTTAATGAAGAGACGATTAGGGACTTAAAAGAGAAGGTT
GAAATGATACCAAATGAACAACTTTAA

Upstream 100 bases:

>100_bases
GGGAGGTTGGTGTTGTCATCAAGCCAGAACACATGGAAGATTTAAGGGTTGTTGGTGTTAAAAAATTGACAGAGTTTTAA
ACTCTTTTTTTGGTGATTCT

Downstream 100 bases:

>100_bases
TATACTTTGAGCTTAAAAATAGAGATTAATGATTACGTGGTGGTGTTATGGCAGTTGCCTATGCTAAGTTATATGAGTTG
ATACTTAAAAAGGTTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAKVRHGCRTERIELIIKINHLKRENLKLRNKIADYKRTLYLIRGKGCKLTEELLKIEIENCIKMIKFNEETIRDLKEKV
EMIPNEQL

Sequences:

>Translated_88_residues
MAKVRHGCRTERIELIIKINHLKRENLKLRNKIADYKRTLYLIRGKGCKLTEELLKIEIENCIKMIKFNEETIRDLKEKV
EMIPNEQL
>Mature_87_residues
AKVRHGCRTERIELIIKINHLKRENLKLRNKIADYKRTLYLIRGKGCKLTEELLKIEIENCIKMIKFNEETIRDLKEKVE
MIPNEQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y350_METJA (Q57796)

Other databases:

- EMBL:   L77117
- PIR:   F64343
- RefSeq:   NP_247324.1
- GeneID:   1451207
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0350
- NMPDR:   fig|243232.1.peg.361
- TIGR:   MJ0350
- OMA:   CRTERIE
- ProtClustDB:   CLSK2517592
- BioCyc:   MJAN243232:MJ_0350-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10593; Mature: 10462

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVRHGCRTERIELIIKINHLKRENLKLRNKIADYKRTLYLIRGKGCKLTEELLKIEIE
CCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHH
NCIKMIKFNEETIRDLKEKVEMIPNEQL
HHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKVRHGCRTERIELIIKINHLKRENLKLRNKIADYKRTLYLIRGKGCKLTEELLKIEIE
CCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHH
NCIKMIKFNEETIRDLKEKVEMIPNEQL
HHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087