| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668519
Identifier: 15668519
GI number: 15668519
Start: 316817
End: 317359
Strand: Direct
Name: 15668519
Synonym: MJ0344
Alternate gene names: NA
Gene position: 316817-317359 (Clockwise)
Preceding gene: 15668518
Following gene: 15668520
Centisome position: 19.03
GC content: 34.81
Gene sequence:
>543_bases ATGGCCGTACTTGCATCATCCACAGAACCAGAACCTACAGAGTCATTACTACAACAAACTAATGAATTATTAATTATTGG CAAAGGAGCTATAGTTTATAAAGAATTCACTACTGGGGTAGATGCGAGAATTATAGACTCTCAAACGATAGGAATAGGGA TTCCATTTAATTATTATCCGTTTATGTGTATGGTATTAGATGATGCAGGTAATGGAATACCAATGCAAGAATTTACTTCA GCACCTGGCAGTTTAACTGTAAAAGTAGCAGCAACATTGGACTCTACAAAAACTTATAAAATAATTGCATTTTTGATTGG AGACTCAATGAAAATAATAACATCCATTCAAAGTCAATCTGGAACTGTCACTGAGATTGCTCCAGGATTTGGAATATTTA AAGTCATTTACAATGACACTGAGGGAACTGACACACTAACAATAAATTATGATGATGGAACCAGTGAAACAATAACAGTT GATAAAAGTAACTTATGGACTGTGTTACCAATGCAACTACCAGATGCAGAAAGGGTAGCATAG
Upstream 100 bases:
>100_bases TATACACATAAATGTAGTTGGAAATAGCTTTAATGAGCATCAATTAGCTCAAAAAATTGCTTTGATTTTGAAAAAACAAA GGTTTAGATGAGGTGATATT
Downstream 100 bases:
>100_bases TGGTGATTGTTATGCCTCCTCTAATCTCAAACAATACTTTTTTTTTGATGAATACTACAAACGATGGCAATGGTGGCAGT GTTAGTTACGATTATCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYPFMCMVLDDAGNGIPMQEFTS APGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQSGTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITV DKSNLWTVLPMQLPDAERVA
Sequences:
>Translated_180_residues MAVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYPFMCMVLDDAGNGIPMQEFTS APGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQSGTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITV DKSNLWTVLPMQLPDAERVA >Mature_179_residues AVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYPFMCMVLDDAGNGIPMQEFTSA PGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQSGTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITVD KSNLWTVLPMQLPDAERVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y344_METJA (Q57790)
Other databases:
- EMBL: L77117 - PIR: H64342 - RefSeq: NP_247317.1 - GeneID: 1451200 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0344 - NMPDR: fig|243232.1.peg.354 - TIGR: MJ0344 - OMA: SENNTID - ProtClustDB: CLSK2517588 - BioCyc: MJAN243232:MJ_0344-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19402; Mature: 19271
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYP CEEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEECCCCCEEEECCCEEEEECCCCCCC FMCMVLDDAGNGIPMQEFTSAPGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQS EEEEEEECCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCC GTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITVDKSNLWTVLPMQLPDAERVA CCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCEEEEEEEECCCHHCCC >Mature Secondary Structure AVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYP EEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEECCCCCEEEECCCEEEEECCCCCCC FMCMVLDDAGNGIPMQEFTSAPGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQS EEEEEEECCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCC GTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITVDKSNLWTVLPMQLPDAERVA CCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCEEEEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087