| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668512
Identifier: 15668512
GI number: 15668512
Start: 311296
End: 312084
Strand: Direct
Name: 15668512
Synonym: MJ0337
Alternate gene names: NA
Gene position: 311296-312084 (Clockwise)
Preceding gene: 15668511
Following gene: 15668513
Centisome position: 18.7
GC content: 34.6
Gene sequence:
>789_bases ATGATGGCACTTAATGAGTATGATGCTCAAATTGTAGAGCAGGCAATGAAACCAATACTTGATTCAAACTTATTTTCAAG GAAAATTTTCCAAAAAAAGAAAATTCCTGAAGATGTGGAGGTTTATAATTTAGTTCAAGTTGTGTTTGATGAAAATGCGT TTAAAAAGGGTTCAATGGAATTGACAGAAGTTCCAATTAAGACAACAACCTCACCATTCACAGTATTTGACATTAATCTG AAAGTTACAAAAGCGAGGAGGTTTGTTGAAGGACCTAATGCTGACTATAATAAAGCACAAATTTTTGAAGGTCTCGCAAA GGTTGTGGCAAGGGCTGAAAATCAATACTCAATTGATGCATTGAGTAAAAACAATACAGCAGTGGGTGCATCAGCATCAT GGAATGGTGCAGATACCACTCCAGATAAAATAGCAAATGACATCATAGATGCAAAAACAAAGATTGAGCAGTATTCAAAT GCAAAATGTGCGTTAGTAGCTCCAGTTGATGCAATTGCATGTTTTAGGAAAATAGGAACTCAAGGTTTTAGTGCTTATGA TGAAACAAAGGATTTCATTAAGGAAATCATCCCAACAAACTTAATCACTGATAAATCTGCATATTTAGTCCCAATTGATA TTGCAATTCTTCAAATGGGAGTAGCTGTGGAGGCAGACCAATTTATTGAAAAGAAAGCGACTCAGGTTGAGTTTATATTT ACAGAGGCAATAAGCCCTATGGTTAAGGAAAAGAATGGAATTATTAAGATTCAAAAAGTATTGGGATAA
Upstream 100 bases:
>100_bases GATGGCAGTGGCAAGGCAGTTAAAAGCCCGATTAAGGCAGGGTTCAAAGTGGCATCTGTTGAGGGGAATTACTGCACTAT TATTTTGAGATAGAGGTGAG
Downstream 100 bases:
>100_bases TGCGTGATTTTTATGGTTGATGTTTCGGAAATTTTAGCGAAGATGAAGCCCCTCTTAGGAATGAGTGCTGATGAAGAATT TGCCAATCCTGAACAAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MMALNEYDAQIVEQAMKPILDSNLFSRKIFQKKKIPEDVEVYNLVQVVFDENAFKKGSMELTEVPIKTTTSPFTVFDINL KVTKARRFVEGPNADYNKAQIFEGLAKVVARAENQYSIDALSKNNTAVGASASWNGADTTPDKIANDIIDAKTKIEQYSN AKCALVAPVDAIACFRKIGTQGFSAYDETKDFIKEIIPTNLITDKSAYLVPIDIAILQMGVAVEADQFIEKKATQVEFIF TEAISPMVKEKNGIIKIQKVLG
Sequences:
>Translated_262_residues MMALNEYDAQIVEQAMKPILDSNLFSRKIFQKKKIPEDVEVYNLVQVVFDENAFKKGSMELTEVPIKTTTSPFTVFDINL KVTKARRFVEGPNADYNKAQIFEGLAKVVARAENQYSIDALSKNNTAVGASASWNGADTTPDKIANDIIDAKTKIEQYSN AKCALVAPVDAIACFRKIGTQGFSAYDETKDFIKEIIPTNLITDKSAYLVPIDIAILQMGVAVEADQFIEKKATQVEFIF TEAISPMVKEKNGIIKIQKVLG >Mature_262_residues MMALNEYDAQIVEQAMKPILDSNLFSRKIFQKKKIPEDVEVYNLVQVVFDENAFKKGSMELTEVPIKTTTSPFTVFDINL KVTKARRFVEGPNADYNKAQIFEGLAKVVARAENQYSIDALSKNNTAVGASASWNGADTTPDKIANDIIDAKTKIEQYSN AKCALVAPVDAIACFRKIGTQGFSAYDETKDFIKEIIPTNLITDKSAYLVPIDIAILQMGVAVEADQFIEKKATQVEFIF TEAISPMVKEKNGIIKIQKVLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y337_METJA (Q57783)
Other databases:
- EMBL: L77117 - PIR: A64342 - RefSeq: NP_247310.1 - ProteinModelPortal: Q57783 - GeneID: 1451193 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0337 - NMPDR: fig|243232.1.peg.347 - TIGR: MJ0337 - OMA: ESASKSW - ProtClustDB: CLSK2517581 - BioCyc: MJAN243232:MJ_0337-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29046; Mature: 29046
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALNEYDAQIVEQAMKPILDSNLFSRKIFQKKKIPEDVEVYNLVQVVFDENAFKKGSME CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCE LTEVPIKTTTSPFTVFDINLKVTKARRFVEGPNADYNKAQIFEGLAKVVARAENQYSIDA EEECCCEECCCCEEEEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LSKNNTAVGASASWNGADTTPDKIANDIIDAKTKIEQYSNAKCALVAPVDAIACFRKIGT ECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC QGFSAYDETKDFIKEIIPTNLITDKSAYLVPIDIAILQMGVAVEADQFIEKKATQVEFIF CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TEAISPMVKEKNGIIKIQKVLG HHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure MMALNEYDAQIVEQAMKPILDSNLFSRKIFQKKKIPEDVEVYNLVQVVFDENAFKKGSME CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCE LTEVPIKTTTSPFTVFDINLKVTKARRFVEGPNADYNKAQIFEGLAKVVARAENQYSIDA EEECCCEECCCCEEEEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LSKNNTAVGASASWNGADTTPDKIANDIIDAKTKIEQYSNAKCALVAPVDAIACFRKIGT ECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC QGFSAYDETKDFIKEIIPTNLITDKSAYLVPIDIAILQMGVAVEADQFIEKKATQVEFIF CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TEAISPMVKEKNGIIKIQKVLG HHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087