| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668471
Identifier: 15668471
GI number: 15668471
Start: 279749
End: 280360
Strand: Direct
Name: 15668471
Synonym: MJ0296
Alternate gene names: NA
Gene position: 279749-280360 (Clockwise)
Preceding gene: 15668468
Following gene: 15668473
Centisome position: 16.8
GC content: 26.31
Gene sequence:
>612_bases TTGATATATATTAGCATGTTTAAATTTCTATTTAAAATTTTAATTGGTGAAATTATGATAAAACTCCTATATGAAGGGAT TTTAATCAGAGAAAATGGAATAATTAAGAAGGCCTCATCTTCATCAACGTTAATTATTACAGACAACAACAATATAATTG TTGATACTTCAACAAAAGATATGGAAAATATTATTATTAAAGGCTTATCTGAACTAAATCTATCTCCAAATGATATAGAT GTAGTTATAAACACACATCTCCATTATGACCATATAGAAAACAACCCAATATTTAAAAACGCTACATTTTATGCCTCACC AAAAGAGTTTGGATTTAACGATAACTTTGAAGATTTTAAAAAGTTTAAAGATAAAGAAATTGAGATTATTGAAACTCCTG GACATACCTATGGCTCTATATCGGTTATTTATAAAGATTATGTTGTTGTAGGAGATGCATCTCCTTTAAAAAATAATATA CTAAAGATGATTCCTCCAAAGTTGAATGTAGATGAAAAATTAGCTTTAGAGAGTTTAAAGAAAATTAGAAAACTGAGAAA AAATGTTATTACTGGACATGAGGGAATTGTTTATAAGGAAAAATTGTTATGA
Upstream 100 bases:
>100_bases TTATAGCTTTCTTCAACAGCCACGTAATCTTCCATATCATAAAAATCTCTGCCATTAAACTTTTTTATCTTCACCTTTTT AATCATAATAAACCCCTTAA
Downstream 100 bases:
>100_bases ATTAAAGGATTAAACAAAATATAACCAACAACTTATTTTTTAATAGAAATAGCTATCTATCATCAAATCTTCAATAGTTT TTATTATTTTATTTAGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIYISMFKFLFKILIGEIMIKLLYEGILIRENGIIKKASSSSTLIITDNNNIIVDTSTKDMENIIIKGLSELNLSPNDID VVINTHLHYDHIENNPIFKNATFYASPKEFGFNDNFEDFKKFKDKEIEIIETPGHTYGSISVIYKDYVVVGDASPLKNNI LKMIPPKLNVDEKLALESLKKIRKLRKNVITGHEGIVYKEKLL
Sequences:
>Translated_203_residues MIYISMFKFLFKILIGEIMIKLLYEGILIRENGIIKKASSSSTLIITDNNNIIVDTSTKDMENIIIKGLSELNLSPNDID VVINTHLHYDHIENNPIFKNATFYASPKEFGFNDNFEDFKKFKDKEIEIIETPGHTYGSISVIYKDYVVVGDASPLKNNI LKMIPPKLNVDEKLALESLKKIRKLRKNVITGHEGIVYKEKLL >Mature_203_residues MIYISMFKFLFKILIGEIMIKLLYEGILIRENGIIKKASSSSTLIITDNNNIIVDTSTKDMENIIIKGLSELNLSPNDID VVINTHLHYDHIENNPIFKNATFYASPKEFGFNDNFEDFKKFKDKEIEIIETPGHTYGSISVIYKDYVVVGDASPLKNNI LKMIPPKLNVDEKLALESLKKIRKLRKNVITGHEGIVYKEKLL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y296_METJA (Q57744)
Other databases:
- EMBL: L77117 - PIR: A64337 - RefSeq: NP_247269.1 - ProteinModelPortal: Q57744 - GeneID: 1451151 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0296 - NMPDR: fig|243232.1.peg.306 - TIGR: MJ0296 - HOGENOM: HBG539033 - OMA: FDHVSNN - ProtClustDB: CLSK876148 - BioCyc: MJAN243232:MJ_0296-MONOMER - InterPro: IPR001279 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 23236; Mature: 23236
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYISMFKFLFKILIGEIMIKLLYEGILIRENGIIKKASSSSTLIITDNNNIIVDTSTKD CEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCEEEEECCCCEEEECCCHH MENIIIKGLSELNLSPNDIDVVINTHLHYDHIENNPIFKNATFYASPKEFGFNDNFEDFK HHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEECCHHCCCCCCHHHHH KFKDKEIEIIETPGHTYGSISVIYKDYVVVGDASPLKNNILKMIPPKLNVDEKLALESLK HCCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCHHHCHHHHCCCCCCCCHHHHHHHHH KIRKLRKNVITGHEGIVYKEKLL HHHHHHHHHCCCCCCEEEHHCCC >Mature Secondary Structure MIYISMFKFLFKILIGEIMIKLLYEGILIRENGIIKKASSSSTLIITDNNNIIVDTSTKD CEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCEEEEECCCCEEEECCCHH MENIIIKGLSELNLSPNDIDVVINTHLHYDHIENNPIFKNATFYASPKEFGFNDNFEDFK HHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEECCHHCCCCCCHHHHH KFKDKEIEIIETPGHTYGSISVIYKDYVVVGDASPLKNNILKMIPPKLNVDEKLALESLK HCCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCHHHCHHHHCCCCCCCCHHHHHHHHH KIRKLRKNVITGHEGIVYKEKLL HHHHHHHHHCCCCCCEEEHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087