| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668449
Identifier: 15668449
GI number: 15668449
Start: 260510
End: 261124
Strand: Reverse
Name: 15668449
Synonym: MJ0275
Alternate gene names: NA
Gene position: 261124-260510 (Counterclockwise)
Preceding gene: 15668450
Following gene: 15668448
Centisome position: 15.68
GC content: 24.39
Gene sequence:
>615_bases TTGAGTATGAAAAAAGTATCAATAATTGTTTTATTTATATTATCTTTAATTTTAACTATTTCAATTTGTGGATGTTTTGA GAATGAAAAAGAGGAAGTAAATAAACCAAATATGACAGTCATTGAAAAAGAAAATATAAAAGTCCAAAACAATAAACCAA TAGAAAATTTAAAAGAAGAATCCTGTAAGTTAAATATTACAAATGATGAAAATAGAACAAATAATATAACAAAAACTACA AAAAAATACGATTTTTCAAAGCCAGTTGATATGGACAAGATGTTTTTAAATCTTCCTTATAATGAAGAGACGGACTTTGA TGATAAAATAATAAAAAAATATAAAAACATAACCTTTGTAGTCAGCAGAAAGCCAATTGACCTTTCCTATGCATACATAT ATAATGAAGTTAAAGAGTATCCTGAAAGGGATATTTTTGGCAACTACATATATTACGAGTTCATTCCAAAAAATGCCAAT TTATCAATTAGTTACTGCTATTATAGAAAAGTTGGTAATTACTATATAATTATGCAAACTTATGAGAAAAGTAGAAAAGC TAATGATTTGTGGATGAATTGGACAAAATATGTATTTAGTTTATTTGAGGAATAA
Upstream 100 bases:
>100_bases TTTTTAAATATAGACCCCAAATTGAATATGTGGTTAAAAAAGATGCTGAACTTTTAAAAATTTTAAGGGAGAAAATTGAA AATAAAGAAAGAAAAAGGGG
Downstream 100 bases:
>100_bases ATTTTCATTTTATTTTTAATTTTAATTTTCTAATTTTTGTTCAATTTAAACTATAAATCGCCTCAGTGCTCATACGGTTC ATCACAGACTCAGCAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSMKKVSIIVLFILSLILTISICGCFENEKEEVNKPNMTVIEKENIKVQNNKPIENLKEESCKLNITNDENRTNNITKTT KKYDFSKPVDMDKMFLNLPYNEETDFDDKIIKKYKNITFVVSRKPIDLSYAYIYNEVKEYPERDIFGNYIYYEFIPKNAN LSISYCYYRKVGNYYIIMQTYEKSRKANDLWMNWTKYVFSLFEE
Sequences:
>Translated_204_residues MSMKKVSIIVLFILSLILTISICGCFENEKEEVNKPNMTVIEKENIKVQNNKPIENLKEESCKLNITNDENRTNNITKTT KKYDFSKPVDMDKMFLNLPYNEETDFDDKIIKKYKNITFVVSRKPIDLSYAYIYNEVKEYPERDIFGNYIYYEFIPKNAN LSISYCYYRKVGNYYIIMQTYEKSRKANDLWMNWTKYVFSLFEE >Mature_203_residues SMKKVSIIVLFILSLILTISICGCFENEKEEVNKPNMTVIEKENIKVQNNKPIENLKEESCKLNITNDENRTNNITKTTK KYDFSKPVDMDKMFLNLPYNEETDFDDKIIKKYKNITFVVSRKPIDLSYAYIYNEVKEYPERDIFGNYIYYEFIPKNANL SISYCYYRKVGNYYIIMQTYEKSRKANDLWMNWTKYVFSLFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y275_METJA (Q57723)
Other databases:
- EMBL: L77117 - PIR: D64334 - RefSeq: NP_247247.1 - ProteinModelPortal: Q57723 - GeneID: 1451129 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0275 - NMPDR: fig|243232.1.peg.284 - TIGR: MJ0275 - OMA: AYLYNDV - ProtClustDB: CLSK796354 - BioCyc: MJAN243232:MJ_0275-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24482; Mature: 24351
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc4149cc)-;
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKKVSIIVLFILSLILTISICGCFENEKEEVNKPNMTVIEKENIKVQNNKPIENLKEE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCEEEECCCCHHHHHCC SCKLNITNDENRTNNITKTTKKYDFSKPVDMDKMFLNLPYNEETDFDDKIIKKYKNITFV CCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCEEEE VSRKPIDLSYAYIYNEVKEYPERDIFGNYIYYEFIPKNANLSISYCYYRKVGNYYIIMQT EECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEEE YEKSRKANDLWMNWTKYVFSLFEE CCCCCCCCHHHHHHHHHHHHHHCH >Mature Secondary Structure SMKKVSIIVLFILSLILTISICGCFENEKEEVNKPNMTVIEKENIKVQNNKPIENLKEE CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCEEEECCCCHHHHHCC SCKLNITNDENRTNNITKTTKKYDFSKPVDMDKMFLNLPYNEETDFDDKIIKKYKNITFV CCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCEEEE VSRKPIDLSYAYIYNEVKEYPERDIFGNYIYYEFIPKNANLSISYCYYRKVGNYYIIMQT EECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEEE YEKSRKANDLWMNWTKYVFSLFEE CCCCCCCCHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087