Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is yjjX [C]

Identifier: 15668435

GI number: 15668435

Start: 246417

End: 247079

Strand: Reverse

Name: yjjX [C]

Synonym: MJ0261

Alternate gene names: 15668435

Gene position: 247079-246417 (Counterclockwise)

Preceding gene: 15668437

Following gene: 15668434

Centisome position: 14.84

GC content: 32.88

Gene sequence:

>663_bases
GTGATAGTTATGGACTTTAAAAATAAGAAATGTGAAATCTGTGGTAAAAAGGCAGAGATTTTTTTATTTGGGAGGTTTTT
ATGTAAAAATGAAAAGTGTATTGAAGAGGCTAAAAAGCTGAGCATGGCGAGACATAAGTTGAGGATTGTGGCAGTTGGTT
CTACAAATCCAGTAAAGATAGAGGCGGTTAAAGAAGGGTTTGAGAAGGTTTTAGGAGCTGTTGAAGTAATAGGGGTTGAT
GTTATTAGTGGGGTTTCATCTCATCCAATTGGATTAGAAGAAACTTATTTGGGAGCTTTAAATAGAGCAAAAAATGCGTT
TGAAAAAGTTCAATGCACTTATGCTGTGGGAATAGAGGCAGGTTTAATAAAAGTTGGAGAACATTATATAGATATTCATA
TATGTGTTGTTTTTGATGGAGTTAATGAGACGGTTGGTTTATCTCAAGGTTTTGAATATCCAAAGATTGTAGCTGAAAAA
GTTTTGGAAGGGATTGAAGGTGGAAAAATTGCCGAAGAAATTTCTGGTATTAAAGACATTGGAAAAAACATTGGCTTAAT
TGGTTATCTAACTGATAATAATATAACAAGAAAAGATTTATGCAGGGAGAGTGTTATAATGGCTTTAATTCCAAGAATGA
TAAAAAATGCTCATCTATATTAA

Upstream 100 bases:

>100_bases
CATTATATATTATTATTTGTGAAATTACTACTTCCTTTGATGTTTAACTTATATATATTTTATTTGCAAATTATTTAGCG
AATAGAATTCTTATAATATA

Downstream 100 bases:

>100_bases
ATAGTTCTTTTCAAAACATTATGGAATAAATATATGAGGTGGAATCATTAACCTAAAAATCAGTAAAAAAGATGTTGTTG
AGTGGATAATATTCTTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIVMDFKNKKCEICGKKAEIFLFGRFLCKNEKCIEEAKKLSMARHKLRIVAVGSTNPVKIEAVKEGFEKVLGAVEVIGVD
VISGVSSHPIGLEETYLGALNRAKNAFEKVQCTYAVGIEAGLIKVGEHYIDIHICVVFDGVNETVGLSQGFEYPKIVAEK
VLEGIEGGKIAEEISGIKDIGKNIGLIGYLTDNNITRKDLCRESVIMALIPRMIKNAHLY

Sequences:

>Translated_220_residues
MIVMDFKNKKCEICGKKAEIFLFGRFLCKNEKCIEEAKKLSMARHKLRIVAVGSTNPVKIEAVKEGFEKVLGAVEVIGVD
VISGVSSHPIGLEETYLGALNRAKNAFEKVQCTYAVGIEAGLIKVGEHYIDIHICVVFDGVNETVGLSQGFEYPKIVAEK
VLEGIEGGKIAEEISGIKDIGKNIGLIGYLTDNNITRKDLCRESVIMALIPRMIKNAHLY
>Mature_220_residues
MIVMDFKNKKCEICGKKAEIFLFGRFLCKNEKCIEEAKKLSMARHKLRIVAVGSTNPVKIEAVKEGFEKVLGAVEVIGVD
VISGVSSHPIGLEETYLGALNRAKNAFEKVQCTYAVGIEAGLIKVGEHYIDIHICVVFDGVNETVGLSQGFEYPKIVAEK
VLEGIEGGKIAEEISGIKDIGKNIGLIGYLTDNNITRKDLCRESVIMALIPRMIKNAHLY

Specific function: Unknown

COG id: COG1986

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0244 family [H]

Homologues:

Organism=Escherichia coli, GI87082442, Length=165, Percent_Identity=32.7272727272727, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002786 [H]

Pfam domain/function: PF01931 DUF84 [H]

EC number: NA

Molecular weight: Translated: 24171; Mature: 24171

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMDFKNKKCEICGKKAEIFLFGRFLCKNEKCIEEAKKLSMARHKLRIVAVGSTNPVKI
CEEECCCCCCCEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEH
EAVKEGFEKVLGAVEVIGVDVISGVSSHPIGLEETYLGALNRAKNAFEKVQCTYAVGIEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCH
GLIKVGEHYIDIHICVVFDGVNETVGLSQGFEYPKIVAEKVLEGIEGGKIAEEISGIKDI
HHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GKNIGLIGYLTDNNITRKDLCRESVIMALIPRMIKNAHLY
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVMDFKNKKCEICGKKAEIFLFGRFLCKNEKCIEEAKKLSMARHKLRIVAVGSTNPVKI
CEEECCCCCCCEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEH
EAVKEGFEKVLGAVEVIGVDVISGVSSHPIGLEETYLGALNRAKNAFEKVQCTYAVGIEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCH
GLIKVGEHYIDIHICVVFDGVNETVGLSQGFEYPKIVAEKVLEGIEGGKIAEEISGIKDI
HHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GKNIGLIGYLTDNNITRKDLCRESVIMALIPRMIKNAHLY
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]