| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668432
Identifier: 15668432
GI number: 15668432
Start: 243834
End: 245048
Strand: Reverse
Name: 15668432
Synonym: MJ0258
Alternate gene names: NA
Gene position: 245048-243834 (Counterclockwise)
Preceding gene: 15668433
Following gene: 15668430
Centisome position: 14.72
GC content: 26.17
Gene sequence:
>1215_bases GTGGTGTTTTTTATGTTGATTATTGATGTTAATCATGGAGCTTTAACATTGGCTGAGGAATATTTAAATTTAGGATATGA AGTTGATGTATGGGATATTTACCAAAAAATAAAAAAATCAGAAGATTTTAAAGTTAAATATCAAAAATTAAAAGAAAAAT TTGGAAATAAGTTAAATCTATTTTTTGAACAGCCAAATTTTGAAAAATATGATAGAGTTATAGCCCCAATACACTGCCCA ATAGATGTTGATTTTATCCCATTTACAGATGCTGTATCTAAAATATTAAAGGAGAAGTTTGGAAATATCCATAAAAAAAT AATTAATGTTACAGGAGTTAAGGGAAAGACAACAACAACCTCTTTAATAAACCATATTTTGAAAGATAAATATTCAACTT ACTTACACAACTCAAATTTTGGCTCTATAGCTCCACCAACTATTTTAAAGGTTTTAAATAGTTTAGATATTGACAAATAT GACTTTTTTATATTTGAAACATCTTTAGGATTAATTAAATGCAAATATGGAGCTATAACAAATGTATTAGAAAATTATAA AATAGCTGGTGGGAGAAAGGATGCATTAACTGCAAAGTTTAGTTCTTTAAAAAATGCTGAGTTATCTTTTATAAATAAGA GAGATATTAATAGATATGACTTAAATATAAACCATAAATGCCTAAATGTTGTTGATGTAGATAGGGCAAAGATTTTAGAT AAGTATCCTCTAAAATTTAAATACTTTGATGAAATATTTGAGTTCAGCAAGAACATCTTTGGATTACATTTTGTAGAAAA TTCGTTATTTGCTATAGAGATTTGTAAAAATTTGGTTGATATGGAGGAGATAAGATATAGATTAAAAACCTTCACCATAA AAAATAGAATGGAAATTAAAGAGATAAATAAAAAAATTTTAGTTAAAAATATCAACCCTGGCTTAGATGTAAAAGCTATT TCCTACGCTATAAAAGATTTTTTAGAAGTATTTGGTGGAGATATCTATATTGGCGGGGACTTTGGAATTGTTTGCGAAGA AATTGATGTAAAAAAGCTATCTGAAGTTTTAAAGAGATTTAACTGCCGATATATATTTGTTGGGGAAATTGGAAAAGAGT TGCTAAATTATTTAAATGGGGGGTATATTAAGAGTTATGATGAAAATAAGATAAAGAGAGACTCTTTAGTTATTCTTAGA GAAAAAATAAAATAA
Upstream 100 bases:
>100_bases AACACGGTTTGTTATTGACATGTTTAAAGGGAGTATAACATAACTGATTGGATATTATTTAATTTAATAAAATTTTAATT TTAATAAAAATCTCTTTTTT
Downstream 100 bases:
>100_bases CCACTATAGAATAATTATTCAAAAATCTTTGGATTTATCTTTCTATTTTCATTTTACAACCATAGGGCTTCGCCCTATTG GGATACCCCATTTACACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MVFFMLIIDVNHGALTLAEEYLNLGYEVDVWDIYQKIKKSEDFKVKYQKLKEKFGNKLNLFFEQPNFEKYDRVIAPIHCP IDVDFIPFTDAVSKILKEKFGNIHKKIINVTGVKGKTTTTSLINHILKDKYSTYLHNSNFGSIAPPTILKVLNSLDIDKY DFFIFETSLGLIKCKYGAITNVLENYKIAGGRKDALTAKFSSLKNAELSFINKRDINRYDLNINHKCLNVVDVDRAKILD KYPLKFKYFDEIFEFSKNIFGLHFVENSLFAIEICKNLVDMEEIRYRLKTFTIKNRMEIKEINKKILVKNINPGLDVKAI SYAIKDFLEVFGGDIYIGGDFGIVCEEIDVKKLSEVLKRFNCRYIFVGEIGKELLNYLNGGYIKSYDENKIKRDSLVILR EKIK
Sequences:
>Translated_404_residues MVFFMLIIDVNHGALTLAEEYLNLGYEVDVWDIYQKIKKSEDFKVKYQKLKEKFGNKLNLFFEQPNFEKYDRVIAPIHCP IDVDFIPFTDAVSKILKEKFGNIHKKIINVTGVKGKTTTTSLINHILKDKYSTYLHNSNFGSIAPPTILKVLNSLDIDKY DFFIFETSLGLIKCKYGAITNVLENYKIAGGRKDALTAKFSSLKNAELSFINKRDINRYDLNINHKCLNVVDVDRAKILD KYPLKFKYFDEIFEFSKNIFGLHFVENSLFAIEICKNLVDMEEIRYRLKTFTIKNRMEIKEINKKILVKNINPGLDVKAI SYAIKDFLEVFGGDIYIGGDFGIVCEEIDVKKLSEVLKRFNCRYIFVGEIGKELLNYLNGGYIKSYDENKIKRDSLVILR EKIK >Mature_404_residues MVFFMLIIDVNHGALTLAEEYLNLGYEVDVWDIYQKIKKSEDFKVKYQKLKEKFGNKLNLFFEQPNFEKYDRVIAPIHCP IDVDFIPFTDAVSKILKEKFGNIHKKIINVTGVKGKTTTTSLINHILKDKYSTYLHNSNFGSIAPPTILKVLNSLDIDKY DFFIFETSLGLIKCKYGAITNVLENYKIAGGRKDALTAKFSSLKNAELSFINKRDINRYDLNINHKCLNVVDVDRAKILD KYPLKFKYFDEIFEFSKNIFGLHFVENSLFAIEICKNLVDMEEIRYRLKTFTIKNRMEIKEINKKILVKNINPGLDVKAI SYAIKDFLEVFGGDIYIGGDFGIVCEEIDVKKLSEVLKRFNCRYIFVGEIGKELLNYLNGGYIKSYDENKIKRDSLVILR EKIK
Specific function: Unknown
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y258_METJA (Q57706)
Other databases:
- EMBL: L77117 - PIR: C64332 - RefSeq: NP_247230.1 - ProteinModelPortal: Q57706 - GeneID: 1451112 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0258 - NMPDR: fig|243232.1.peg.267 - TIGR: MJ0258 - HOGENOM: HBG539029 - OMA: GCTCEEI - ProtClustDB: CLSK876132 - BioCyc: MJAN243232:MJ_0258-MONOMER - InterPro: IPR013221 - Gene3D: G3DSA:3.40.1190.10
Pfam domain/function: PF08245 Mur_ligase_M; SSF53623 Mur_ligase_cen
EC number: NA
Molecular weight: Translated: 46913; Mature: 46913
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFFMLIIDVNHGALTLAEEYLNLGYEVDVWDIYQKIKKSEDFKVKYQKLKEKFGNKLNL CEEEEEEEECCCCHHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE FFEQPNFEKYDRVIAPIHCPIDVDFIPFTDAVSKILKEKFGNIHKKIINVTGVKGKTTTT EEECCCHHHHCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SLINHILKDKYSTYLHNSNFGSIAPPTILKVLNSLDIDKYDFFIFETSLGLIKCKYGAIT HHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEEEHHHHH NVLENYKIAGGRKDALTAKFSSLKNAELSFINKRDINRYDLNINHKCLNVVDVDRAKILD HHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEEECHHHHHHH KYPLKFKYFDEIFEFSKNIFGLHFVENSLFAIEICKNLVDMEEIRYRLKTFTIKNRMEIK CCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH EINKKILVKNINPGLDVKAISYAIKDFLEVFGGDIYIGGDFGIVCEEIDVKKLSEVLKRF HHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHH NCRYIFVGEIGKELLNYLNGGYIKSYDENKIKRDSLVILREKIK CCCEEEEHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVFFMLIIDVNHGALTLAEEYLNLGYEVDVWDIYQKIKKSEDFKVKYQKLKEKFGNKLNL CEEEEEEEECCCCHHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE FFEQPNFEKYDRVIAPIHCPIDVDFIPFTDAVSKILKEKFGNIHKKIINVTGVKGKTTTT EEECCCHHHHCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SLINHILKDKYSTYLHNSNFGSIAPPTILKVLNSLDIDKYDFFIFETSLGLIKCKYGAIT HHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEEEHHHHH NVLENYKIAGGRKDALTAKFSSLKNAELSFINKRDINRYDLNINHKCLNVVDVDRAKILD HHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEEECHHHHHHH KYPLKFKYFDEIFEFSKNIFGLHFVENSLFAIEICKNLVDMEEIRYRLKTFTIKNRMEIK CCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHH EINKKILVKNINPGLDVKAISYAIKDFLEVFGGDIYIGGDFGIVCEEIDVKKLSEVLKRF HHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHH NCRYIFVGEIGKELLNYLNGGYIKSYDENKIKRDSLVILREKIK CCCEEEEHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087