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The map label for this gene is 15668347

Identifier: 15668347

GI number: 15668347

Start: 177469

End: 178137

Strand: Reverse

Name: 15668347

Synonym: MJ0175

Alternate gene names: NA

Gene position: 178137-177469 (Counterclockwise)

Preceding gene: 15668353

Following gene: 15668344

Centisome position: 10.7

GC content: 28.7

Gene sequence:

>669_bases
GTGTATAAACAAATACTAACAATAGGGTATATAAAATTTTTGGTGGTAGCAATGGATGAGCTAAATTATCTAATAAACTA
CCTTGCAAATAAAGATAGTGTTAGAGAAGAAATTTTAAAGTTATCAAGGGAAATAACAAGAGATTGTGCAATGTTAATTA
GAAAAATTCACAAATCAGACGATAAAGATGAGTTTAAAGACAAATTAAATGAGATATCAGAAAAAATTAAAAAACTAAAT
AGTTTAGCAACATTCCCAGAGTTTGTTGGATATTTATCTACCCCTCAACAGGAATTTGTTGAGGCATTATCTTTGTATAT
GATAAAGTTTGATAATAAGATTCCAAGTTTCAAAGAGCTTGATTTTATTAAAGAAGAGAACTACATCTTAGGATTAGCTG
ATGTGATTGGAGAGTTGAGGAGAGAGGTATTAGAGGCAATGAAAAATGATAATTTAGCAGAGGTTGAAAGGTATTTCAAA
TTTATGGAAGATTTATATGAATTTTTAATGAACTTTGATTATTATCACGTAGTGGATAATTTGAGAAGGAAGCAGGATAT
TAGTAGAGGAATCTTAGAAAAAACCCATGGAGATATTGTTACTTTTATTCAAAATCTTAAGCTTAGAGAACATTTAAAAA
GAGTTCAAATAGGACTTTCGCAGGAATAA

Upstream 100 bases:

>100_bases
ACTATATTTTGCAAACCTGTCATTGCCCTACCCGGGCTTTTCAGGTTTGCATTATTTGAGGTATAAATTAATAACGGATT
AGTGTAATAAAAGAAAAGGA

Downstream 100 bases:

>100_bases
ATCTCTATAAGGAAAATGATGCCTTTTAGGCATCTAAATTCCAAATTCAATATATAAACTGCGAAAGTCCTATTCAAGAG
TAATTATTCAATAGGGAATC

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MYKQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHKSDDKDEFKDKLNEISEKIKKLN
SLATFPEFVGYLSTPQQEFVEALSLYMIKFDNKIPSFKELDFIKEENYILGLADVIGELRREVLEAMKNDNLAEVERYFK
FMEDLYEFLMNFDYYHVVDNLRRKQDISRGILEKTHGDIVTFIQNLKLREHLKRVQIGLSQE

Sequences:

>Translated_222_residues
MYKQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHKSDDKDEFKDKLNEISEKIKKLN
SLATFPEFVGYLSTPQQEFVEALSLYMIKFDNKIPSFKELDFIKEENYILGLADVIGELRREVLEAMKNDNLAEVERYFK
FMEDLYEFLMNFDYYHVVDNLRRKQDISRGILEKTHGDIVTFIQNLKLREHLKRVQIGLSQE
>Mature_222_residues
MYKQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHKSDDKDEFKDKLNEISEKIKKLN
SLATFPEFVGYLSTPQQEFVEALSLYMIKFDNKIPSFKELDFIKEENYILGLADVIGELRREVLEAMKNDNLAEVERYFK
FMEDLYEFLMNFDYYHVVDNLRRKQDISRGILEKTHGDIVTFIQNLKLREHLKRVQIGLSQE

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y175_METJA (Q57639)

Other databases:

- EMBL:   L77117
- PIR:   H64321
- RefSeq:   NP_247143.1
- ProteinModelPortal:   Q57639
- GeneID:   1451022
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0175
- NMPDR:   fig|243232.1.peg.180
- TIGR:   MJ0175
- HOGENOM:   HBG578140
- OMA:   RRYILDG
- ProtClustDB:   PRK14562
- BioCyc:   MJAN243232:MJ_0175-MONOMER
- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068
- Gene3D:   G3DSA:1.20.58.200
- Gene3D:   G3DSA:1.20.58.190

Pfam domain/function: PF01997 Translin; SSF74784 Translin

EC number: NA

Molecular weight: Translated: 26426; Mature: 26426

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHKSD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKDEFKDKLNEISEKIKKLNSLATFPEFVGYLSTPQQEFVEALSLYMIKFDNKIPSFKEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
DFIKEENYILGLADVIGELRREVLEAMKNDNLAEVERYFKFMEDLYEFLMNFDYYHVVDN
HHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LRRKQDISRGILEKTHGDIVTFIQNLKLREHLKRVQIGLSQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYKQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHKSD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKDEFKDKLNEISEKIKKLNSLATFPEFVGYLSTPQQEFVEALSLYMIKFDNKIPSFKEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
DFIKEENYILGLADVIGELRREVLEAMKNDNLAEVERYFKFMEDLYEFLMNFDYYHVVDN
HHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LRRKQDISRGILEKTHGDIVTFIQNLKLREHLKRVQIGLSQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087