| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668322
Identifier: 15668322
GI number: 15668322
Start: 146067
End: 146588
Strand: Direct
Name: 15668322
Synonym: MJ0150
Alternate gene names: NA
Gene position: 146067-146588 (Clockwise)
Preceding gene: 15668315
Following gene: 15668323
Centisome position: 8.77
GC content: 31.42
Gene sequence:
>522_bases ATGGGGGATGTTAAAATGGATAAAGAGCTTTTACATAAAAAAATTAAAAAAGATATTGAGGATTTAATAAACAACCATCC TCCAGAAAGAACGTTAGGGAATTTAATACCCTTATCTATATTTCAAGCAGTAAGAATAGGAGTTTTAACTGCTGGATGTG GCATTGAAGCAATAATTTACAATATTGGAAAAGATATTGGTAGAGAAGTAATTTCAAGATACGTCGATAGGGACAATTTA CTCGAAAGCTTTGCAGAAATATTAAAGAAGGCAAAAATTGGCATTTTAGAAGTAAAAAAAGTTGAAGAAAATGAGATGAT TCTAATTTTAAAAGACTGCATATCTTGCCATAATGTTCCAAATGTTGGAACTACCCTCTGTCATTTTGAGGCTGGACTAA TAGCTGGAACTTTGGAAAAAAAGCTAAGAAGAAAAGTCAATGCTGTTGAAACAAAATGTTGTGGAAAGGGTGATGAGTAC TGCGAATTTTTAGTAAAAATTGAAGATAAATTGTATTGGTGA
Upstream 100 bases:
>100_bases ATTATAAAAAATTCAAATGCGATATCTCTAAGCATGGTATCAGAATAAACAAGCTTTATTAATGAATAATCCTACATTTG TTATATAAATCTTTGACTGT
Downstream 100 bases:
>100_bases TTAAATGCTTGATAGAATTGATTTAAAAATTCTAAGAATTTTAAATGGAAATGCCAGAAAATCATTTAGAGAAATTGGGA GAGAATTGGGTATTAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGDVKMDKELLHKKIKKDIEDLINNHPPERTLGNLIPLSIFQAVRIGVLTAGCGIEAIIYNIGKDIGREVISRYVDRDNL LESFAEILKKAKIGILEVKKVEENEMILILKDCISCHNVPNVGTTLCHFEAGLIAGTLEKKLRRKVNAVETKCCGKGDEY CEFLVKIEDKLYW
Sequences:
>Translated_173_residues MGDVKMDKELLHKKIKKDIEDLINNHPPERTLGNLIPLSIFQAVRIGVLTAGCGIEAIIYNIGKDIGREVISRYVDRDNL LESFAEILKKAKIGILEVKKVEENEMILILKDCISCHNVPNVGTTLCHFEAGLIAGTLEKKLRRKVNAVETKCCGKGDEY CEFLVKIEDKLYW >Mature_172_residues GDVKMDKELLHKKIKKDIEDLINNHPPERTLGNLIPLSIFQAVRIGVLTAGCGIEAIIYNIGKDIGREVISRYVDRDNLL ESFAEILKKAKIGILEVKKVEENEMILILKDCISCHNVPNVGTTLCHFEAGLIAGTLEKKLRRKVNAVETKCCGKGDEYC EFLVKIEDKLYW
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y150_METJA (Q57614)
Other databases:
- EMBL: L77117 - PIR: G64318 - RefSeq: NP_247118.1 - ProteinModelPortal: Q57614 - SMR: Q57614 - GeneID: 1450994 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0150 - NMPDR: fig|243232.1.peg.155 - TIGR: MJ0150 - HOGENOM: HBG541171 - OMA: DECITCA - ProtClustDB: CLSK2517554 - BioCyc: MJAN243232:MJ_0150-MONOMER - InterPro: IPR004096
Pfam domain/function: PF02830 V4R
EC number: NA
Molecular weight: Translated: 19524; Mature: 19393
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVKMDKELLHKKIKKDIEDLINNHPPERTLGNLIPLSIFQAVRIGVLTAGCGIEAIIY CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NIGKDIGREVISRYVDRDNLLESFAEILKKAKIGILEVKKVEENEMILILKDCISCHNVP HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHEECCCCCEEEHHHHHHHHCCCC NVGTTLCHFEAGLIAGTLEKKLRRKVNAVETKCCGKGDEYCEFLVKIEDKLYW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GDVKMDKELLHKKIKKDIEDLINNHPPERTLGNLIPLSIFQAVRIGVLTAGCGIEAIIY CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NIGKDIGREVISRYVDRDNLLESFAEILKKAKIGILEVKKVEENEMILILKDCISCHNVP HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHEECCCCCEEEHHHHHHHHCCCC NVGTTLCHFEAGLIAGTLEKKLRRKVNAVETKCCGKGDEYCEFLVKIEDKLYW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087