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The map label for this gene is 15668316

Identifier: 15668316

GI number: 15668316

Start: 141394

End: 142170

Strand: Reverse

Name: 15668316

Synonym: MJ0144

Alternate gene names: NA

Gene position: 142170-141394 (Counterclockwise)

Preceding gene: 15668317

Following gene: 15668311

Centisome position: 8.54

GC content: 28.19

Gene sequence:

>777_bases
ATGAACAAAAAAATAGAAGAATTAAATAAATTAGATAAAAAAGTTGTCTTAGCACCAATGGCAGGCATTACGGATGGGGA
TTTCTGCAGAAAATTTAAGGATTTGTTTGCCATTGTTACCATTGGTGGCTACAACTTAGATTCTGCAACCTATAAAGCAA
GTAGAGATATAGAGAAAAGGGGAAGGAAAGAATTTTCTATAAATTTAGAAGAATTTAATAGCTATATAATTGAGCAAATA
AAAAAGGCAAGAGAAAGTAATGCCTTAGTTTCAGTTAATGTTAGATTTGTTGATATAGATGAAGCTTATGACAAACTATT
GACTATTGCCAAACATGCTGATATCATTGAACTTAACTGCCATTGCAGACAGCCAGAGATAACTTCTTTAGGTATAGGGC
AAGAGCTAATGAAAAATAAAAATCTTTTAAAAGAATTTTTAACTAAAATGAAAGAGTTAAATAAACCAATTTTTTTAAAG
ATAAGATTAAATTGCATCCCACTAAAAGAGCTAATAGATAATTTAAACTATGTGAGAGATTATTTTGATGGATTACATGT
TGATTGCTTTTATCCAGGAAAACCTTATGCAGATATGGATTCATTAAAAATTTTGGCAGAAGAATTTAACGATAAGATAA
TAATTGGAAATAACTCAATTGATTCAATAGAAAAAGCTAAGGAAATGTTAAAATACTCTGATTTTGTATCTGTTGCAAGG
ACTATTTTAAAAGGTAATGTTGAATGGATAAAAGAGTTAAATAAAGAGAATATTTAA

Upstream 100 bases:

>100_bases
AGTTGATAAGAATGTATGCACTTTAAAGCAGGATGACTTCTTAGAATCAAAAATGGGTATGGGAAAAATATACCATCCAC
AGTTTTAGGTGATTTTATAG

Downstream 100 bases:

>100_bases
TTTTTATTTTTATTGCCAAGTTTTTTAAATTCTTTGGCTAAACACTCAAAAACTTCTTTATCTTCCACATTCTCAAATAT
CTTTATTATATCGTAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNKKIEELNKLDKKVVLAPMAGITDGDFCRKFKDLFAIVTIGGYNLDSATYKASRDIEKRGRKEFSINLEEFNSYIIEQI
KKARESNALVSVNVRFVDIDEAYDKLLTIAKHADIIELNCHCRQPEITSLGIGQELMKNKNLLKEFLTKMKELNKPIFLK
IRLNCIPLKELIDNLNYVRDYFDGLHVDCFYPGKPYADMDSLKILAEEFNDKIIIGNNSIDSIEKAKEMLKYSDFVSVAR
TILKGNVEWIKELNKENI

Sequences:

>Translated_258_residues
MNKKIEELNKLDKKVVLAPMAGITDGDFCRKFKDLFAIVTIGGYNLDSATYKASRDIEKRGRKEFSINLEEFNSYIIEQI
KKARESNALVSVNVRFVDIDEAYDKLLTIAKHADIIELNCHCRQPEITSLGIGQELMKNKNLLKEFLTKMKELNKPIFLK
IRLNCIPLKELIDNLNYVRDYFDGLHVDCFYPGKPYADMDSLKILAEEFNDKIIIGNNSIDSIEKAKEMLKYSDFVSVAR
TILKGNVEWIKELNKENI
>Mature_258_residues
MNKKIEELNKLDKKVVLAPMAGITDGDFCRKFKDLFAIVTIGGYNLDSATYKASRDIEKRGRKEFSINLEEFNSYIIEQI
KKARESNALVSVNVRFVDIDEAYDKLLTIAKHADIIELNCHCRQPEITSLGIGQELMKNKNLLKEFLTKMKELNKPIFLK
IRLNCIPLKELIDNLNYVRDYFDGLHVDCFYPGKPYADMDSLKILAEEFNDKIIIGNNSIDSIEKAKEMLKYSDFVSVAR
TILKGNVEWIKELNKENI

Specific function: Unknown

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y144_METJA (Q57608)

Other databases:

- EMBL:   L77117
- PIR:   A64318
- RefSeq:   NP_247112.1
- ProteinModelPortal:   Q57608
- GeneID:   1450988
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0144
- NMPDR:   fig|243232.1.peg.149
- TIGR:   MJ0144
- HOGENOM:   HBG541229
- OMA:   ELNCHCR
- ProtClustDB:   CLSK876087
- BioCyc:   MJAN243232:MJ_0144-MONOMER
- InterPro:   IPR013785
- InterPro:   IPR005270
- InterPro:   IPR001269
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR11082
- TIGRFAMs:   TIGR00736

Pfam domain/function: PF01207 Dus

EC number: NA

Molecular weight: Translated: 29754; Mature: 29754

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIEELNKLDKKVVLAPMAGITDGDFCRKFKDLFAIVTIGGYNLDSATYKASRDIEKR
CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCHHHC
GRKEFSINLEEFNSYIIEQIKKARESNALVSVNVRFVDIDEAYDKLLTIAKHADIIELNC
CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHCCCEEEEEC
HCRQPEITSLGIGQELMKNKNLLKEFLTKMKELNKPIFLKIRLNCIPLKELIDNLNYVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECHHHHHHHHHHHHH
YFDGLHVDCFYPGKPYADMDSLKILAEEFNDKIIIGNNSIDSIEKAKEMLKYSDFVSVAR
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TILKGNVEWIKELNKENI
HHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MNKKIEELNKLDKKVVLAPMAGITDGDFCRKFKDLFAIVTIGGYNLDSATYKASRDIEKR
CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCHHHC
GRKEFSINLEEFNSYIIEQIKKARESNALVSVNVRFVDIDEAYDKLLTIAKHADIIELNC
CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHCCCEEEEEC
HCRQPEITSLGIGQELMKNKNLLKEFLTKMKELNKPIFLKIRLNCIPLKELIDNLNYVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECHHHHHHHHHHHHH
YFDGLHVDCFYPGKPYADMDSLKILAEEFNDKIIIGNNSIDSIEKAKEMLKYSDFVSVAR
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TILKGNVEWIKELNKENI
HHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087