Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668298

Identifier: 15668298

GI number: 15668298

Start: 123668

End: 124033

Strand: Reverse

Name: 15668298

Synonym: MJ0127

Alternate gene names: NA

Gene position: 124033-123668 (Counterclockwise)

Preceding gene: 15668299

Following gene: 15668297

Centisome position: 7.45

GC content: 28.14

Gene sequence:

>366_bases
ATGCCTAAAAAAGATGTTAGAGCATTTTTATATGACATCTTAGAGAATATGAAAGATATCATCGATTTCACAAATGATAT
GACATTTGATGAGTTTTTAAAAGATAAAAAGACACAAAAAGCAGTGATTAGAAGTTTAGAAGTTATTGGTGAGGCAGTTA
AAAATCTTCCAGAAGATTTTATAAATAAATATCCACAAGTTCCGTGGAAAGGCATGGCAAGGTTAAGAGATAAGTTAATT
CATCATTATTTTGGAATAAATTATGAGATTATTTGGGATATTGTAATTAATAAAGTTCCAAACGATATAAAAGAAATAGA
GGAAATTATAAAAGACATTGAGGGAGAGGATGAAAACTCTATCTGA

Upstream 100 bases:

>100_bases
TTAGGAATTAAAGTAGATTTAGTTATTAAAGGAGCGATAAAAAATCCTTATATTAAAAAATCTATTGAAGAGGATTTAAT
TTATGTATAGTGGTGATTAA

Downstream 100 bases:

>100_bases
AATAAAAGAAATCTTAAGGAAACATAAAAAAGAATTAAAAGAAAAATATAAAGTTAAATCTATAGCCATATTTGGCTCTT
ATGCAAGAAATGAACAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPKKDVRAFLYDILENMKDIIDFTNDMTFDEFLKDKKTQKAVIRSLEVIGEAVKNLPEDFINKYPQVPWKGMARLRDKLI
HHYFGINYEIIWDIVINKVPNDIKEIEEIIKDIEGEDENSI

Sequences:

>Translated_121_residues
MPKKDVRAFLYDILENMKDIIDFTNDMTFDEFLKDKKTQKAVIRSLEVIGEAVKNLPEDFINKYPQVPWKGMARLRDKLI
HHYFGINYEIIWDIVINKVPNDIKEIEEIIKDIEGEDENSI
>Mature_120_residues
PKKDVRAFLYDILENMKDIIDFTNDMTFDEFLKDKKTQKAVIRSLEVIGEAVKNLPEDFINKYPQVPWKGMARLRDKLIH
HYFGINYEIIWDIVINKVPNDIKEIEEIIKDIEGEDENSI

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y127_METJA (Q57591)

Other databases:

- EMBL:   L77117
- PIR:   G64315
- RefSeq:   NP_247092.1
- ProteinModelPortal:   Q57591
- GeneID:   1450969
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0127
- NMPDR:   fig|243232.1.peg.129
- TIGR:   MJ0127
- HOGENOM:   HBG660714
- OMA:   IWDIVIN
- ProtClustDB:   CLSK214456
- BioCyc:   MJAN243232:MJ_0127-MONOMER
- InterPro:   IPR008201

Pfam domain/function: PF01934 DUF86

EC number: NA

Molecular weight: Translated: 14358; Mature: 14227

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKDVRAFLYDILENMKDIIDFTNDMTFDEFLKDKKTQKAVIRSLEVIGEAVKNLPEDF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
INKYPQVPWKGMARLRDKLIHHYFGINYEIIWDIVINKVPNDIKEIEEIIKDIEGEDENS
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
I
C
>Mature Secondary Structure 
PKKDVRAFLYDILENMKDIIDFTNDMTFDEFLKDKKTQKAVIRSLEVIGEAVKNLPEDF
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
INKYPQVPWKGMARLRDKLIHHYFGINYEIIWDIVINKVPNDIKEIEEIIKDIEGEDENS
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087