| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668286
Identifier: 15668286
GI number: 15668286
Start: 112782
End: 113249
Strand: Reverse
Name: 15668286
Synonym: MJ0115
Alternate gene names: NA
Gene position: 113249-112782 (Counterclockwise)
Preceding gene: 15668287
Following gene: 15668284
Centisome position: 6.8
GC content: 34.62
Gene sequence:
>468_bases ATGGGCTGGGAGAATGCTCCATCTCATATATGTAGGGGAGGAGATTTGAGAGGTTTAGCTTTTTGCTGTCCTCCAATAAA ATACTGTCCTATTCATAAAGCGTTAGCTGTATTGAAAATGTCACCAGAGGAGTTTATAAGAATAAAGGAAGAATTTGGAA AGAGGACAAAACTTGGTTTAGGAGAAAATACATGCTTTGGTAGTTTAGTTTGGTGTTGTAAAATAACAAAACCCTGCCCT TACAGGGATTATGAGCTTGCTAAAAACAACATAAGTCCAGATGAATACATGGAGCTAAAAAAACAGCTTGCTGAGGAAAT TATAAGAAATAGCCAGTTTTTTAAAGAGGCAGTGGAAGTTTTTGTTAAAAAAGGCATTCCAAAAGATATTGCTGAAAAAT GTATCTTAGAGACAGGAGATTTAAAGAAAGCCTATGAAATGGCTATAAAAATGATTGATAAGGATTAA
Upstream 100 bases:
>100_bases AGATTTGGAGTTAAGTTGGATAAAAAACTTGGAGAGAAAATTTTGAATAACGCAATAGAAAAAGTTGTTGAAAAAATAAA AGAAATGATAAGGTGAAATT
Downstream 100 bases:
>100_bases GATAATGGGATTTTGTTTTCCTGAAATGTTTTAAACATGTCATACTCTTCTTTTGATAGCTTATAGATGGAGTATTTAAC ATCTTCAACAATACACATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGWENAPSHICRGGDLRGLAFCCPPIKYCPIHKALAVLKMSPEEFIRIKEEFGKRTKLGLGENTCFGSLVWCCKITKPCP YRDYELAKNNISPDEYMELKKQLAEEIIRNSQFFKEAVEVFVKKGIPKDIAEKCILETGDLKKAYEMAIKMIDKD
Sequences:
>Translated_155_residues MGWENAPSHICRGGDLRGLAFCCPPIKYCPIHKALAVLKMSPEEFIRIKEEFGKRTKLGLGENTCFGSLVWCCKITKPCP YRDYELAKNNISPDEYMELKKQLAEEIIRNSQFFKEAVEVFVKKGIPKDIAEKCILETGDLKKAYEMAIKMIDKD >Mature_154_residues GWENAPSHICRGGDLRGLAFCCPPIKYCPIHKALAVLKMSPEEFIRIKEEFGKRTKLGLGENTCFGSLVWCCKITKPCPY RDYELAKNNISPDEYMELKKQLAEEIIRNSQFFKEAVEVFVKKGIPKDIAEKCILETGDLKKAYEMAIKMIDKD
Specific function: Unknown
COG id: COG4008
COG function: function code K; Predicted metal-binding transcription factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y115_METJA (Q57579)
Other databases:
- EMBL: L77117 - PIR: C64314 - RefSeq: NP_247079.1 - GeneID: 1450957 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0115 - NMPDR: fig|243232.1.peg.116 - TIGR: MJ0115 - HOGENOM: HBG541200 - OMA: GEDEYME - ProtClustDB: CLSK876076 - BioCyc: MJAN243232:MJ_0115-MONOMER - InterPro: IPR017671 - TIGRFAMs: TIGR03277
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17727; Mature: 17596
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWENAPSHICRGGDLRGLAFCCPPIKYCPIHKALAVLKMSPEEFIRIKEEFGKRTKLGL CCCCCCCHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCC GENTCFGSLVWCCKITKPCPYRDYELAKNNISPDEYMELKKQLAEEIIRNSQFFKEAVEV CCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVKKGIPKDIAEKCILETGDLKKAYEMAIKMIDKD HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GWENAPSHICRGGDLRGLAFCCPPIKYCPIHKALAVLKMSPEEFIRIKEEFGKRTKLGL CCCCCCHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCC GENTCFGSLVWCCKITKPCPYRDYELAKNNISPDEYMELKKQLAEEIIRNSQFFKEAVEV CCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVKKGIPKDIAEKCILETGDLKKAYEMAIKMIDKD HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087