Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668248

Identifier: 15668248

GI number: 15668248

Start: 71620

End: 71961

Strand: Direct

Name: 15668248

Synonym: MJ0076

Alternate gene names: NA

Gene position: 71620-71961 (Clockwise)

Preceding gene: 15668244

Following gene: 15668252

Centisome position: 4.3

GC content: 30.12

Gene sequence:

>342_bases
ATGGAGGTTAATCTCTTAAGTATATCTATAAAGCCCCCAATAAAAATACCTAAGAATAAAACGGTAGAGTTAGATGTTGA
TTGGAACATTGAGTATAAAAAATTAGACGCAAAAAAATTCAACTTTGTTTGTAATATCAAAGCTTATGGAGACTTTTCCT
TTGAAGCAAATATTGAAGGAGAGATAAGCACTGAAAATGATTATGATAACATCCCAGACTTTATATCTGTAAGTATAGTA
GAGAATTTGATGAAATCTCTTCCTAAGTTAGTTAGCTATGCTCAACAATTCAGAATTGAGGAAAATGTATTTGTTAATCA
GCCTTTATCTCTTGCATCATAA

Upstream 100 bases:

>100_bases
TATTTGTCATATCTAATCATTCTTTCACCATAATACTAAATCTAAAATAAATCATAAAATATATATACTATCTTGTATAA
AAGTATTACACGGTGAGAGT

Downstream 100 bases:

>100_bases
TTATAGTTTTTTGCAAACATCTTGAAATACATAAGGTTATAATGAACGCCTTCTTATTGAAGGCGTTCAATTTTCCTTTA
TAATTTTAATTACTTTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEVNLLSISIKPPIKIPKNKTVELDVDWNIEYKKLDAKKFNFVCNIKAYGDFSFEANIEGEISTENDYDNIPDFISVSIV
ENLMKSLPKLVSYAQQFRIEENVFVNQPLSLAS

Sequences:

>Translated_113_residues
MEVNLLSISIKPPIKIPKNKTVELDVDWNIEYKKLDAKKFNFVCNIKAYGDFSFEANIEGEISTENDYDNIPDFISVSIV
ENLMKSLPKLVSYAQQFRIEENVFVNQPLSLAS
>Mature_113_residues
MEVNLLSISIKPPIKIPKNKTVELDVDWNIEYKKLDAKKFNFVCNIKAYGDFSFEANIEGEISTENDYDNIPDFISVSIV
ENLMKSLPKLVSYAQQFRIEENVFVNQPLSLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y076_METJA (Q60383)

Other databases:

- EMBL:   L77117
- PIR:   E64309
- RefSeq:   NP_247041.1
- GeneID:   1450916
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0076
- NMPDR:   fig|243232.1.peg.78
- TIGR:   MJ0076
- OMA:   QFRIEEN
- ProtClustDB:   CLSK2517544
- BioCyc:   MJAN243232:MJ_0076-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12949; Mature: 12949

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNLLSISIKPPIKIPKNKTVELDVDWNIEYKKLDAKKFNFVCNIKAYGDFSFEANIEG
CCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEEECCCEEEECCCC
EISTENDYDNIPDFISVSIVENLMKSLPKLVSYAQQFRIEENVFVNQPLSLAS
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure
MEVNLLSISIKPPIKIPKNKTVELDVDWNIEYKKLDAKKFNFVCNIKAYGDFSFEANIEG
CCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEEECCCEEEECCCC
EISTENDYDNIPDFISVSIVENLMKSLPKLVSYAQQFRIEENVFVNQPLSLAS
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087