| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668246
Identifier: 15668246
GI number: 15668246
Start: 69233
End: 70330
Strand: Reverse
Name: 15668246
Synonym: MJ0075
Alternate gene names: NA
Gene position: 70330-69233 (Counterclockwise)
Preceding gene: 15668247
Following gene: 15668245
Centisome position: 4.22
GC content: 30.15
Gene sequence:
>1098_bases TTGATAATGAAATTCTTTGATAGGGAGAGGGAGATTAATGAAATTTTGGGCATTTTGGATGAAACTCCAGATAATATCTA CTTCATCTACGGCCCTATAAACAGTGGGAAAACTACTCTAATGATGGAGATAATCAACAGATTAAAAGATGACAAAAAAT ATAGAATCTTCTACTATAATCTAAGAGGAGTTAGAATATCATCTTATAGTGATTTTTTTGATATAATGTTTGAAATTAGG GAGGATAACAAATTTAAACAGATGGTAAAAGATGCTGATGTTTTAGTTGAAGGCATCAAATTTATAGAAAAAACAGCAAA ACTGTTCAATGAGAGCATTATTCTCCCTTCTGACTTGGCAAAAGTTATTCTATCCAAACAGAAGGGTTTTGATGTTTTTA GATACTTGGAGAGAGTTTTTAGAGAGATGAATAAAAAGGGTCTAAAGCCTGTAATTATTATTGACGAACTGCAGAGATTA AAAGGATTGAAATCTAATGGAGAGTTGATAGATGATTTATTTAATTTTTTTGTTAGATTGACTAAGGAATTGCATATAAC GCACTGTTTTTGTTTAAGCTCTGATAGTTTATTTATTGAGTATGTTTATGATAGGGCTGAACTCAGAGGGAGAGCTGACT ATATATTAGTGGATGACTTTGATAAGGAAACTGCCTTAAAATTTATGGATTTTTTATCTGAGGATATTTTAGGCAGGAAA CTTTCTGAGGATGAGAAGGAGCTAATTTATAGCTATGTTGGTGGGAAGCCAAAGGATGTTTATGATGTGATTATTAAGCT AAAGCTTGGTAAGGAGTTAAAGGATATCTTGGAGTTCATGCTCAAAGAAGAAATCCAAAAGCTAAAATACTTCTTAGAGG ATGTTAAAGAAGATGATGAAGAGCTTTATAACAAAATAGTTGATGCATTGAAGATATTTAAAGAAAATTATGAAATTGAA GATATAAAAATACCTAAGAATATTAGAGAGTTTTTAGTTAAGAAAAATATATTGTTTTTAAATCCAATAGAAGGGACATT AAAGCCTCAAAGTTTTTTAGTATGGAATGCTATAAAGAAATTACTGAATGGACATTAA
Upstream 100 bases:
>100_bases GTCAAAAACAGCAGAAAAGGTGTTTGATATGTTGATTTAACAAAAGTTATAAATTTGCAATCTCATATAGATTTAGAATA AAATAATCAACATAGAGGGA
Downstream 100 bases:
>100_bases TTGGGACTGAAAGTCCCAACTTAATGGACGAGTTTTGATGAAACTTTTACTAAAAGTTTCCTTTAAAGCCTCAAAGTTTT TTAGTATGGAATGCTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MIMKFFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGVRISSYSDFFDIMFEIR EDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVILSKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRL KGLKSNGELIDDLFNFFVRLTKELHITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRK LSEDEKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDEELYNKIVDALKIFKENYEIE DIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLLNGH
Sequences:
>Translated_365_residues MIMKFFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGVRISSYSDFFDIMFEIR EDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVILSKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRL KGLKSNGELIDDLFNFFVRLTKELHITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRK LSEDEKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDEELYNKIVDALKIFKENYEIE DIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLLNGH >Mature_365_residues MIMKFFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGVRISSYSDFFDIMFEIR EDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVILSKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRL KGLKSNGELIDDLFNFFVRLTKELHITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRK LSEDEKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDEELYNKIVDALKIFKENYEIE DIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLLNGH
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal ATPase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y075_METJA (Q60388)
Other databases:
- EMBL: L77117 - PIR: C64309 - RefSeq: NP_247039.1 - ProteinModelPortal: Q60388 - SMR: Q60388 - GeneID: 1450914 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0075 - NMPDR: fig|243232.1.peg.76 - TIGR: MJ0075 - HOGENOM: HBG538932 - ProtClustDB: CLSK539704 - BioCyc: MJAN243232:MJ_0075-MONOMER - InterPro: IPR003593 - InterPro: IPR011579 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382
Pfam domain/function: PF01637 Arch_ATPase
EC number: NA
Molecular weight: Translated: 43328; Mature: 43328
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMKFFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYN CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEE LRGVRISSYSDFFDIMFEIREDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLA EEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KVILSKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRLKGLKSNGELIDDLFNFFVRL HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH TKELHITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRK HHHHHHEEEEEECCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC LSEDEKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDE CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELYNKIVDALKIFKENYEIEDIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKK HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHH LLNGH HHCCC >Mature Secondary Structure MIMKFFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYN CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEE LRGVRISSYSDFFDIMFEIREDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLA EEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KVILSKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRLKGLKSNGELIDDLFNFFVRL HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH TKELHITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRK HHHHHHEEEEEECCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC LSEDEKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDE CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELYNKIVDALKIFKENYEIEDIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKK HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHH LLNGH HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9045616