| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668242
Identifier: 15668242
GI number: 15668242
Start: 67211
End: 67483
Strand: Direct
Name: 15668242
Synonym: MJ0071
Alternate gene names: NA
Gene position: 67211-67483 (Clockwise)
Preceding gene: 15668241
Following gene: 15668243
Centisome position: 4.04
GC content: 26.74
Gene sequence:
>273_bases ATGAAGTTTAACGTTGAGATACATAAAAGAGTCTTAAAAGATTTAAAGGATTTGCCTCCCTCAAACTTAAAGAAGTTTAA AGAACTAATAGAAACATTAAAAACCAATCCCATTCCAAAAGAAAAATTTGATATTAAAAGATTAAAAGGCAGTGATGAGG TTTATAGAGTTAGAATTGGAAAATTTAGAGTTCAATATGTTGTTTTATGGGATGATAGAATAATAATAATTAGAAAGATA AGTAGAAGAGAAGGAGCTTATAAAAATCCCTAA
Upstream 100 bases:
>100_bases TTGAAGAGGATTATGAAGAAATTATAGAAGATGTTAAAAAATCTCTGGATAAAAAAGAGACTGTGCCAGCAGAAGAGGCT TTGAAAGAATTGGGATTATT
Downstream 100 bases:
>100_bases GCTATTAAAAATTCTAATGGCTACATTTTTATATCTCTTTTCTTAATTCAAATAGAAAAAACAGATTCGGCTGATACCAT GATTATTCTTTTAGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKFNVEIHKRVLKDLKDLPPSNLKKFKELIETLKTNPIPKEKFDIKRLKGSDEVYRVRIGKFRVQYVVLWDDRIIIIRKI SRREGAYKNP
Sequences:
>Translated_90_residues MKFNVEIHKRVLKDLKDLPPSNLKKFKELIETLKTNPIPKEKFDIKRLKGSDEVYRVRIGKFRVQYVVLWDDRIIIIRKI SRREGAYKNP >Mature_90_residues MKFNVEIHKRVLKDLKDLPPSNLKKFKELIETLKTNPIPKEKFDIKRLKGSDEVYRVRIGKFRVQYVVLWDDRIIIIRKI SRREGAYKNP
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y071_METJA (Q60374)
Other databases:
- EMBL: L77117 - PIR: G64308 - RefSeq: NP_247035.1 - ProteinModelPortal: Q60374 - SMR: Q60374 - GeneID: 1450910 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0071 - NMPDR: fig|243232.1.peg.72 - TIGR: MJ0071 - HOGENOM: HBG705334 - OMA: RENTFRV - ProtClustDB: CLSK542025 - BioCyc: MJAN243232:MJ_0071-MONOMER - InterPro: IPR007712
Pfam domain/function: PF05016 Plasmid_stabil
EC number: NA
Molecular weight: Translated: 10851; Mature: 10851
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNVEIHKRVLKDLKDLPPSNLKKFKELIETLKTNPIPKEKFDIKRLKGSDEVYRVRIG CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEEC KFRVQYVVLWDDRIIIIRKISRREGAYKNP EEEEEEEEEECCCEEEEEECHHCCCCCCCC >Mature Secondary Structure MKFNVEIHKRVLKDLKDLPPSNLKKFKELIETLKTNPIPKEKFDIKRLKGSDEVYRVRIG CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEEC KFRVQYVVLWDDRIIIIRKISRREGAYKNP EEEEEEEEEECCCEEEEEECHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087