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The map label for this gene is 15668208

Identifier: 15668208

GI number: 15668208

Start: 38790

End: 39443

Strand: Reverse

Name: 15668208

Synonym: MJ0038

Alternate gene names: NA

Gene position: 39443-38790 (Counterclockwise)

Preceding gene: 15668209

Following gene: 15668205

Centisome position: 2.37

GC content: 30.28

Gene sequence:

>654_bases
ATGGTTAGAGGGCAATATAAAAAAGGAAACGATGAAAGAATGAGATTTCCTAAAAAAAATAAGCCACAAAAATTTGAAAA
CTACGCATGGGTTTTGGATTATTTACCTTACGGTTATCCCGACAAACCTGATGAACCTATAGTTCAAGGGCTTGGAGAAT
ATCAGTTTTTATTAATGGAGATGATTCCAAAACCAAATGTAGATATTGAATTAGGTGAAAGAGTCTATATTGGAAAAGGT
AAGAGAGATAAAATAGACCACGTTAGAAGAATGATTAAATATGAACAACTAACTCCAACAGCTAAATCAGAACTTTTATA
TGTAGTAATGGAAGCCGTTAAAATACAGGAGGATAGGTTTGTGAGATTCTTTAATGAATGCCCACCAATAACCACAAGAT
TACATACCTTAGAATTACTTCCAGAAATTAAAAAGAAATATATGTGGAAAATTATTGAAGAGAGAGAAGCAAAAAAATTT
GAAAGTTTTAAGGACTTTGAAGAGAGAATTGGGAAAAATCCTGTGAGAATTATAGCTAAAAGAATTGAAAAAGAGCTTTC
AGATGACAAAAAAGATAAATACTACTTATTTGTAAAATGGAAGAAAGGAATAATATTGAATGAGGATAATATGACATTCT
ATCTAAAAGAATAG

Upstream 100 bases:

>100_bases
CAAAACCTAACACCTCCTCGCTACGCTCGGAGGTGTAAATTAAGTCCAGGGTGTTTATTGCTCCGATATATTCGTAGATT
TAAATGAAGGGTGAAATTTT

Downstream 100 bases:

>100_bases
TCATAAATGTGTTTTAGCAAACTCTCTCAAATCTCTAAGAGTCCCAAAATTTAGCAGACCAATATCAGTTATTGCTATAA
CCTCTGCCTCTAAGTAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MVRGQYKKGNDERMRFPKKNKPQKFENYAWVLDYLPYGYPDKPDEPIVQGLGEYQFLLMEMIPKPNVDIELGERVYIGKG
KRDKIDHVRRMIKYEQLTPTAKSELLYVVMEAVKIQEDRFVRFFNECPPITTRLHTLELLPEIKKKYMWKIIEEREAKKF
ESFKDFEERIGKNPVRIIAKRIEKELSDDKKDKYYLFVKWKKGIILNEDNMTFYLKE

Sequences:

>Translated_217_residues
MVRGQYKKGNDERMRFPKKNKPQKFENYAWVLDYLPYGYPDKPDEPIVQGLGEYQFLLMEMIPKPNVDIELGERVYIGKG
KRDKIDHVRRMIKYEQLTPTAKSELLYVVMEAVKIQEDRFVRFFNECPPITTRLHTLELLPEIKKKYMWKIIEEREAKKF
ESFKDFEERIGKNPVRIIAKRIEKELSDDKKDKYYLFVKWKKGIILNEDNMTFYLKE
>Mature_217_residues
MVRGQYKKGNDERMRFPKKNKPQKFENYAWVLDYLPYGYPDKPDEPIVQGLGEYQFLLMEMIPKPNVDIELGERVYIGKG
KRDKIDHVRRMIKYEQLTPTAKSELLYVVMEAVKIQEDRFVRFFNECPPITTRLHTLELLPEIKKKYMWKIIEEREAKKF
ESFKDFEERIGKNPVRIIAKRIEKELSDDKKDKYYLFVKWKKGIILNEDNMTFYLKE

Specific function: Unknown

COG id: COG1491

COG function: function code J; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y038_METJA (Q60345)

Other databases:

- EMBL:   L77117
- PIR:   F64304
- RefSeq:   NP_247001.1
- ProteinModelPortal:   Q60345
- SMR:   Q60345
- GeneID:   1450876
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0038
- NMPDR:   fig|243232.1.peg.38
- TIGR:   MJ0038
- HOGENOM:   HBG512886
- OMA:   YAYVLDY
- ProtClustDB:   CLSK2749830
- BioCyc:   MJAN243232:MJ_0038-MONOMER
- InterPro:   IPR007003
- InterPro:   IPR012340
- Gene3D:   G3DSA:2.40.50.140

Pfam domain/function: PF04919 DUF655

EC number: NA

Molecular weight: Translated: 26274; Mature: 26274

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGQYKKGNDERMRFPKKNKPQKFENYAWVLDYLPYGYPDKPDEPIVQGLGEYQFLLME
CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHH
MIPKPNVDIELGERVYIGKGKRDKIDHVRRMIKYEQLTPTAKSELLYVVMEAVKIQEDRF
HCCCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VRFFNECPPITTRLHTLELLPEIKKKYMWKIIEEREAKKFESFKDFEERIGKNPVRIIAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIEKELSDDKKDKYYLFVKWKKGIILNEDNMTFYLKE
HHHHHHCCCCCCCEEEEEEEECCEEECCCCEEEEEEC
>Mature Secondary Structure
MVRGQYKKGNDERMRFPKKNKPQKFENYAWVLDYLPYGYPDKPDEPIVQGLGEYQFLLME
CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHH
MIPKPNVDIELGERVYIGKGKRDKIDHVRRMIKYEQLTPTAKSELLYVVMEAVKIQEDRF
HCCCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VRFFNECPPITTRLHTLELLPEIKKKYMWKIIEEREAKKFESFKDFEERIGKNPVRIIAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIEKELSDDKKDKYYLFVKWKKGIILNEDNMTFYLKE
HHHHHHCCCCCCCEEEEEEEECCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087